A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 5FD3  PDB ID: 5FD3 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
12C_DA2:DT12_D120
18C_DA8:DT6_D120
19C_DA9:DT5_D120
110C_DA10:DT4_D120
111C_DC11:DG3_D119
11C_DG1:DC13_D119
13C_DG3:DC11_D119
17C_DG7:DC7_D119
14C_DT4:DA10_D120
15C_DT5:DA9_D120
16C_DT6:DA8_D120
112C_DT12:DA2_D120
114H_DA2:DT12_I120
120H_DA8:DT6_I120
121H_DA9:DT5_I120
122H_DA10:DT4_I120
123H_DC11:DG3_I119
113H_DG1:DC13_I119
115H_DG3:DC11_I119
119H_DG7:DC7_I119
116H_DT4:DA10_I120
117H_DT5:DA9_I120
118H_DT6:DA8_I120
124H_DT12:DA2_I120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)