A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: 5FW3  PDB ID: 5FW3 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_A1:DT28_C-0.063-0.138-0.24-10.309-9.685-6.254
13A_A3:DT26_C0.053-0.1040.044-7.253-0.8095.272
14A_A4:DT25_C0.086-0.1210.1233.0043.9090.102
18A_A8:DT21_C0.082-0.1920.259-2.095-2.2944.306
19A_A9:DT20_C-0.016-0.2240.06-2.49-9.5972.07
115A_A15:DT14_C-0.002-0.2240.003-2.735-6.1042.133
116A_A16:DT13_C0.029-0.176-0.33-2.117-0.2851.235
117A_A17:DT12_C0.091-0.21-0.315-5.498-2.0453.245
118A_A18:DT11_C-0.167-0.193-0.146-12.544-3.9765.453
119A_A19:DT10_C-0.062-0.174-0.045-0.899-3.5886.412
120A_A20:DT9_C-0.09-0.156-0.233-3.033-2.7493.515
126A_A26:U45_A0.069-0.0880.0755.4816.6553.187
130A_A32:U37_A-0.063-0.112-0.142-0.4815.281-7.802
132A_A52:G62_A-7.944-5.2340.003-22.18615.39-48.474
136A_A68:G81_A-0.0262.994-0.035-10.64825.24-56.331
137A_A69:U80_A0.137-0.1931.2612.919-0.279-1.806
15A_C5:DG24_C0.178-0.1640.111-0.558-1.9341.915
17A_C7:DG22_C0.176-0.168-0.063-5.9144.090.921
128A_C30:G39_A0.161-0.1890.29-6.199-11.7460.757
135A_C55:G58_A0.19-0.2150.57114.1656.0193.43
138A_C70:G79_A0.162-0.2020.6255.203-8.0010.189
113A_G13:DC16_C-0.223-0.108-0.116-2.2042.8522.607
121A_G21:U50_A-2.628-0.576-0.049-6.213-4.888-4.128
127A_G29:C40_A-0.212-0.131-0.112-8.789-9.0130.821
131A_G33:A36_A8.082-5.2211.07915.136-14.157-32.157
133A_G53:C61_A-0.221-0.126-0.29-9.026-2.7120.304
134A_G54:C60_A-0.242-0.1260.23-3.043-1.2770.011
141A_G73:A76_A7.411-5.3090.79730.408-5.562-24.293
12A_U2:DA27_C-0.148-0.1240.106-3.193-8.4262.628
16A_U6:DA23_C-0.071-0.0620.09-3.875-0.7224.551
110A_U10:DA19_C-0.025-0.177-0.238-5.761-5.6755.166
111A_U11:DA18_C-0.046-0.1450.03-7.781-8.8164.366
112A_U12:DA17_C-0.14-0.0770.087-8.433-7.6750.783
114A_U14:DA15_C-0.007-0.094-0.026-2.363.2244.892
122A_U22:A49_A-0.074-0.1490.2232.216-7.3182.075
123A_U23:A48_A-0.125-0.0540.1199.738-9.8667.179
124A_U24:A47_A-0.069-0.1890.669-3.697-3.686-1.647
125A_U25:A46_A0.029-0.1730.4710.793-4.9492.656
129A_U31:A38_A-0.059-0.1940.308-0.647-7.888-6.61
139A_U71:A78_A0.071-0.1560.222-3.706-10.6-8.977
140A_U72:A77_A0.005-0.104-0.048-0.752-2.5812.846
143C_DA2:DT11_D0.07-0.1860.7018.634-11.7623.44
144C_DA3:DT10_D0.054-0.099-0.19-4.147-13.0221.883
148C_DA8:DT5_D0.075-0.1370.0447.572-5.3371.762
142C_DC1:DG12_D0.098-0.3510.8684.219-11.89-4.472
145C_DC5:DG8_D0.214-0.098-0.298-1.898-1.9751.884
147C_DC7:DG6_D0.188-0.085-0.2750.2620.155-1.226
146C_DG6:DC7_D-0.278-0.105-0.052-8.5690.7464.53

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.