5KT6: Base Pair Morphology Step Parameters

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As of 22-Jun-2022 number of released structures: 12128

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NDB ID: 5KT6 PDB ID: 5KT6

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	5	TT_DC845DC846:DG868DG869_PP	-0.152	-0.888	3.378	-1.304	0.022	35.216	-1.471	0.051	3.381	0.036	2.154	35.24
1	6	TT_DC846DT847:DA867DG868_PP	-0.22	-0.866	3.659	4.281	-0.067	30.73	-1.605	1.329	3.598	-0.125	-8.029	31.02
1	1	TT_DG841DG842:DC872DC873_PP	0.611	-1.387	3.501	-4.631	1.452	21.927	-4.119	-3.344	3.207	3.757	11.987	22.451
1	2	TT_DG842DG843:DC871DC872_PP	0.603	-1.882	3.102	0.257	4.723	32.259	-4.099	-1.034	2.81	8.444	-0.46	32.595
1	3	TT_DG843DT844:DA870DC871_PP	-0.371	-1.501	3.186	2.89	1.953	33.954	-2.854	1.07	3.057	3.333	-4.932	34.128
1	4	TT_DT844DC845:DG869DA870_PP	0.366	-0.4	3.46	5.557	1.291	32.787	-0.929	0.349	3.456	2.265	-9.753	33.267

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.