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A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 26-Jan-2023 number of released structures: 12597
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NDB ID:
5L1Z
PDB ID:
5L1Z
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
3
N_C29:G36_N
4.656
-0.471
1.118
-12.959
-25.328
27.329
1
4
N_C30:G34_N
-0.352
0.463
0.05
-25.348
-42.298
48.643
1
1
N_G26:C39_N
-0.274
-0.199
-2.262
2.147
23.521
-4.3
1
2
N_G28:C37_N
-2.215
-0.513
-0.221
-10.271
-30.257
11.948
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.
