A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 5LQH  PDB ID: 5LQH 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_DA8:DT19_A0.3450.061-0.759-28.04710.023-4.772
12A_DA20:DT18_A0.541-3.5430.584-19.42814.14169.723
13A_DG4:DG17_A1.993.1790.179-6.3760.798-91.116
14A_DG9:DG21_A-1.951-3.2160.047-3.809-1.68190.07
15A_DG10:DG3_A-2.212-3.020.137-6.666-6.28390.712
16A_DG11:DG15_A3.9161.1660.03321.375-6.931-59.707

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.