A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 5LQH  PDB ID: 5LQH 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11AA_DA8DA20:DT18DT19_AA-0.5852.92-3.099159.67613.244176.4691.4640.246-3.1086.622-79.843179.394
12AA_DA20DG4:DG17DT18_AA-0.3121.433-2.779-1.554-3.958-104.457-0.953-0.179-2.7432.503-0.982-104.518
13AA_DG4DG9:DG21DG17_AA-2.222-2.976-0.341-5.323.682179.78-1.4881.111-0.3411.8412.66179.781
14AA_DG9DG10:DG3DG21_AA1.5632.642-1.041-161.77753.574-143.173-1.2750.921-0.782-26.864-81.121-176.976
15AA_DG10DG11:DG15DG3_AA0.1550.1272.915-3.3534.266122.3110.039-0.1152.9142.4351.914122.382

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.