A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 5LUX  PDB ID: 5LUX 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
111A_5CM11:DG26_F0.395-0.32-0.437.988-20.452-6.338
110A_DA10:DT27_F-0.026-0.1270.1551.26-3.4162.156
113A_DA13:DT24_F1.059-0.2750.2211.779-3.766-9.639
114A_DC14:DG23_F0.29-0.373-0.13520.335-18.909-2.054
115A_DC15:DG22_F-0.7040.2950.651-1.994-18.3196.473
117A_DC17:DG20_F0.2650.136-0.45-0.875-8.113-0.463
13A_DG3:DC34_F-0.4150.052-0.231-23.572-1.868-1.435
15A_DG5:DC32_F-0.987-0.150.3381.759-15.850.844
112A_DG12:5CM25_F0.141-0.0480.0035.053-5.529-5.926
11A_DT1:DA36_F0.54-0.1010.743-11.439-27.6771.613
12A_DT2:DA35_F-0.4990.298-0.6961.304-31.6773.869
14A_DT4:DA33_F-0.405-0.2590.823-11.434-2.7881.645
16A_DT6:DA31_F0.3890.020.454-9.515-13.0050.805
17A_DT7:DA30_F0.513-0.140.228-6.86-13.9631.99
18A_DT8:DA29_F0.33-0.30.407-11.227-11.9673.436
19A_DT9:DA28_F0.151-0.3880.687-7.6050.070.51
116A_DT16:DA21_F-0.5340.1820.5326.878-14.88-6.86
127B_5CM11:DG26_E0.392-0.391-0.4288.837-21.392-3.652
126B_DA10:DT27_E0.013-0.1030.1672.131-3.584.31
129B_DA13:DT24_E0.99-0.2810.11811.278-3.239-8.335
130B_DC14:DG23_E0.246-0.33-0.25420.18-17.94-1.026
131B_DC15:DG22_E-0.6190.3370.47-1.424-17.9787.126
133B_DC17:DG20_E0.0440.287-0.426-4.768-14.8133.455
134B_DC18:DG19_E0.1410.296-1.03911.856-32.88340.944
119B_DG3:DC34_E-0.1360.085-0.198-25.043-2.508-1.942
121B_DG5:DC32_E-0.875-0.180.3750.682-15.924-0.077
128B_DG12:5CM25_E0.054-0.113-0.0894.678-5.285-4.788
118B_DT1:DA36_E0.521-0.1280.937-7.0-25.8131.717
120B_DT4:DA33_E-0.17-0.250.896-12.743-2.9350.513
122B_DT6:DA31_E0.429-0.0340.514-10.037-12.5210.281
123B_DT7:DA30_E0.545-0.1570.266-7.194-13.7162.464
124B_DT8:DA29_E0.406-0.2550.427-11.531-11.674.794
125B_DT9:DA28_E0.164-0.3430.661-7.622-0.3761.445
132B_DT16:DA21_E-0.4670.1460.3327.059-16.84-6.013

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.