A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 16-Oct-2019 number of released structures: 10422
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NDB ID: 5M3J  PDB ID: 5M3J 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
11R_C6:G14_V119
13R_C8:G12_V119
110R_U3:G14_V00
19R_U3:G14_V00
12R_U7:A13_V120
14R_U9:A11_V120
15V_A1:A10_V60
18V_A4:A7_V50
16V_G2:C9_V119
17V_U3:A8_V120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)