A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 4-Dec-2019 number of released structures: 10490
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NDB ID: 5MF0  PDB ID: 5MF0 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11E_DA1:DT16_F-0.0420.0080.028.783-19.59413.136
12E_DC2:DG15_F1.3310.0340.4390.948-29.2535.366
16E_DC6:DG11_F-0.5771.1681.25311.831-34.86118.625
17E_DC7:DG10_F0.824-0.031-0.39915.916-35.3639.094
19E_DC9:DG8_F0.929-0.329-0.1828.002-10.9382.344
112E_DC12:DG5_F1.7690.5730.799-18.524-27.68412.443
113E_DC13:DG4_F1.3660.2060.4534.304-22.3224.5
114E_DC14:DG3_F1.5470.3260.5720.618-19.86615.916
13E_DG3:DC14_F-1.3170.0960.784-0.697-30.53513.243
14E_DG4:DC13_F-0.5850.3550.467-5.044-27.23211.826
15E_DG5:DC12_F-1.5360.2231.627-0.691-39.0414.709
18E_DG8:DC9_F0.1380.042-0.067-11.337-21.109-12.287
110E_DG10:DC7_F-0.3510.2580.5451.437-20.8792.514
111E_DG11:DC6_F-1.0850.3180.676-1.249-41.62518.908
115E_DG15:DC2_F-1.9211.2031.477-6.748-54.84337.671
116E_DT16:DA1_F-1.241-3.8660.8176.78724.33391.31

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.