A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 5MG7  PDB ID: 5MG7 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12CC_DA3DC4:DG17DT18_CC0.026-0.5853.5011.888-2.26534.873-0.6060.2633.527-3.771-3.14334.993
14CC_DA5DT6:DA15DT16_CC1.3093.1810.026-100.281131.927-176.579-1.5910.654-0.025-65.966-50.143-179.575
110CC_DA11DG12:DC9DC10_CC-0.591-0.3223.4352.1554.65631.891-1.4361.463.318.405-3.89132.29
114CC_DA15DT16:DA5DT6_CC-1.309-3.181-0.026100.281-131.927176.579-1.5910.6540.025-65.966-50.143179.575
13CC_DC4DA5:DT16DG17_CC3.202-3.4211.426-172.549-4.131119.371-1.708-1.749-0.34-2.07886.779176.266
17CC_DC8DC9:DG12DG13_CC-0.687-0.1223.231-1.0971.85733.44-0.5131.0143.243.2231.90433.507
18CC_DC9DC10:DA11DG12_CC0.591-0.3223.435-2.1554.65631.891-1.436-1.463.318.4053.89132.29
19CC_DC10DA11:DC10DA11_CC0.01.3053.0550.0-0.0238.1082.0010.03.054-0.030.038.108
113CC_DC14DA15:DT6DG7_CC2.75-3.5432.15-175.404-3.91192.709-1.764-1.749-0.286-1.9788.33176.858
11CC_DG2DA3:DT18DC19_CC0.665-0.2433.4833.835-0.80836.284-0.268-0.4923.537-1.293-6.13736.488
16CC_DG7DC8:DG13DC14_CC0.418-0.363.591.05-2.96940.144-0.152-0.4763.616-4.318-1.52640.262
111CC_DG12DG13:DC8DC9_CC0.687-0.1223.2311.0971.85733.44-0.513-1.0143.243.223-1.90433.507
112CC_DG13DC14:DG7DC8_CC-0.418-0.363.59-1.05-2.96940.144-0.1520.4763.616-4.3181.52640.262
116CC_DG17DT18:DA3DC4_CC-0.026-0.5853.501-1.888-2.26534.873-0.606-0.2633.527-3.7713.14334.993
15CC_DT6DG7:DC14DA15_CC-0.2873.4163.604-3.1423.2942.5551.715-30.994.09243.93641.9065.22
115CC_DT16DG17:DC4DA5_CC-0.3433.4123.496-3.7366.3892.743-8.527-16.9894.1460.16435.1777.893
117CC_DT18DC19:DG2DA3_CC-0.665-0.2433.483-3.835-0.80836.284-0.2680.4923.537-1.2936.13736.488

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.