A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 9-Oct-2019 number of released structures: 10416
Search for released structures

NDB ID: 5NZ6  PDB ID: 5NZ6 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
16AA_A5A35:U18A19_AA-1.528-0.8663.3559.7523.37671.986-0.8421.6093.1172.858-8.25572.623
17AA_A35C36:G17U18_AA-0.456-1.4553.558-7.394-0.01533.588-2.46-0.5033.576-0.02512.60634.369
11AA_C1CBV2:G23G24_AA0.4-2.0743.037-3.5234.40232.022-4.383-1.2582.6777.9036.32432.501
18AA_C36G37:C16G17_AA0.449-2.2463.30.963-2.30531.14-3.719-0.6443.465-4.286-1.7931.238
12AA_CBV2G3:C22G23_AA-0.163-2.2663.0781.717.85430.933-5.3390.5622.43214.423-3.1431.935
111AA_CBV39G40:C13G14_AA-1.048-2.1553.348-3.8680.63434.255-3.7391.1463.4031.0736.54134.471
13AA_G3G4:C21C22_AA0.049-2.0683.097-2.2715.16730.401-4.776-0.4862.7069.7484.28530.909
14AA_G4G29:C20C21_AA-0.998-1.4313.489-3.6440.61543.946-1.9690.9613.5370.824.85944.094
15AA_G29A5:A19C20_AA-3.157-1.963.3977.648.1834.19-4.1966.072.15413.474-12.58435.924
19AA_G37G38:C15C16_AA-0.658-2.353.288-3.3122.28424.664-6.1030.5473.1215.3017.68724.985
110AA_G38CBV39:G14C15_AA0.322-2.2893.118-0.5841.01828.93-4.789-0.7663.032.0371.16828.954
112AA_G40C41:G12C13_AA0.471-1.8073.3366.123.88122.204-5.7830.9123.0019.75-15.37423.342

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.