A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5TXX  PDB ID: 5TXX 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15TT_DA7DC8:DG2DT3_PP-0.572-1.2033.3573.3393.10435.67-2.3931.4053.185.041-5.42435.951
11TT_DC1DG2:DC3DG4_DD-0.8140.5643.1771.0810.64634.7370.8481.5223.161.082-1.8134.759
16TT_DC8DG9:DC1DG2_PP-0.718-1.2153.611-5.6548.15136.566-3.0070.323.34412.7078.81337.843
12TT_DG2DG3:DC2DC3_DD0.932-0.0823.391-0.3085.8234.257-1.057-1.6113.3249.7920.51834.734
13TT_DG3DC4:DG1DC2_DD0.4130.1083.0984.6722.3427.24-0.3160.223.1224.911-9.80527.727
14TT_DT6DA7:DT3DA4_PP0.312-1.1773.137-3.6283.53128.794-3.047-1.3532.9147.0327.22629.227

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.