A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Nov-2017 number of released structures: 9218
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NDB ID: 5TYF  PDB ID: 5TYF 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14TT_DA5DT6:DA4DT5_PP0.657-0.6032.928-2.17.13719.746-4.201-2.5472.47719.925.86121.088
16TT_DA7DC8:DG2DT3_PP-0.324-1.3483.3822.3192.47735.894-2.5360.8573.2584.007-3.75336.049
11TT_DC1DG2:DC3DG4_DD-0.4680.4943.1331.945-3.22135.2671.2581.0393.048-5.298-3.19935.461
17TT_DC8DG9:DC1DG2_PP-0.836-1.3873.614-4.9896.77235.667-3.2180.5873.38610.8718.00836.614
12TT_DG2DG3:DC2DC3_DD0.807-0.3033.3881.2597.45633.342-1.731-1.1683.27412.791-2.1634.165
13TT_DG3DC4:DG1DC2_DD0.450.0223.046.2062.50326.732-0.5330.4913.0545.309-13.16127.542
15TT_DT6DA7:DT3DA4_PP0.226-1.2763.231-5.2355.32128.611-3.573-1.4952.86610.54210.37229.55

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.