5UC6: Base Pair Morphology Step Parameters

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As of 22-Jun-2022 number of released structures: 12128

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NDB ID: 5UC6 PDB ID: 5UC6

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	4	BB_85Y8DA9:85Y15DA16_BB	-0.077	5.067	3.693	0.45	-10.495	-7.366	0.453	0.646	6.268	55.006	2.357	-12.823
1	2	BB_DA5DG6:DG17DA18_BB	2.158	-3.804	4.821	5.848	-3.748	2.473	0.261	29.779	5.264	-38.004	-59.29	7.372
1	1	BB_DC1DG2:DC21DG22_BB	-0.008	5.111	3.739	2.034	1.283	-4.495	-66.112	13.615	2.015	-15.019	23.813	-5.097
1	3	BB_DG685Y8:DA16DG17_BB	-0.237	-0.694	2.977	-7.6	-1.547	-142.238	0.374	-0.161	2.967	0.817	-4.015	-142.328

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.