A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: 5UHC  PDB ID: 5UHC 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13H_DA17:DT11_G0.476-0.1310.282-10.631-4.922-0.993
17H_DA21:DT7_G0.279-0.5210.1533.805-9.466-6.513
12H_DC16:DG12_G0.124-0.3740.401-2.106-14.9719.243
14H_DC18:DG10_G-0.138-0.4640.512-6.06-2.526-1.45
15H_DG19:DC9_G-0.0940.1280.353-0.759-13.762.902
16H_DG20:DC8_G0.677-0.2960.2931.565-6.362.77
19H_DG23:DC5_G-0.567-0.0810.638-9.958-2.392-4.957
11H_DT15:DA13_G-0.760.193-0.1875.228-7.1872.126
18H_DT22:DA6_G-1.427-0.087-0.2347.439-4.52-5.665
111G_DC16:G2_I0.57-0.051-0.68826.239-2.2233.488
110G_DT15:A3_I0.072-0.049-0.50317.696-3.039-5.261

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.