A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 5UHC  PDB ID: 5UHC 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13HH_DA17DC18:DG10DT11_GG-0.099-1.073.251-2.896.25326.425-3.763-0.4822.91813.3916.1927.292
17HH_DA21DT22:DA6DT7_GG0.743-1.4723.3472.5275.5330.198-3.845-0.9093.08510.481-4.78930.79
12HH_DC16DA17:DT11DG12_GG-1.0070.3993.75-1.371-1.78137.080.8991.373.761-2.7982.15437.145
14HH_DC18DG19:DC9DG10_GG-0.2830.4143.1722.5797.92436.161-0.390.7843.16212.561-4.08937.077
15HH_DG19DG20:DC8DC9_GG-0.0570.4913.243-4.1748.737.63-0.334-0.4293.26113.2236.34538.804
16HH_DG20DA21:DT7DC8_GG-0.2930.1293.17-2.4386.56439.946-0.5280.1583.1639.523.53640.53
11HH_DT15DC16:DG12DA13_GG-0.02-0.8493.467-12.05614.21235.284-2.934-1.42.80221.68118.39239.764
18HH_DT22DG23:DC5DA6_GG0.897-0.9114.239-3.3060.21938.791-1.4-1.864.1470.3294.96738.927
19GG_DT15DC16:G2A3_II0.33-1.0443.395-0.74211.95928.379-4.254-0.7652.73323.1321.43530.756

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.