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As of 14-Aug-2019 number of released structures: 10334
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NDB ID: 5VW1  PDB ID: 5VW1 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
19CC_A32G33:A36U37_CC-3.321-1.1052.883-2.6033.04448.47-1.5523.8532.9763.73.16448.625
110CC_A52G53:C61G62_CC4.364-1.8273.4276.3677.28456.278-2.348-4.193.6187.66-6.69557.037
113CC_A68A69:U80G81_CC2.602-0.9882.978-11.44427.54829.282-3.397-4.4990.78142.94217.83941.566
114CC_A69C70:G79U80_CC0.305-1.8213.151.6946.91336.844-3.662-0.2712.78610.813-2.6537.502
17CC_C30U31:A38G39_CC-0.467-1.4973.297-4.2824.74333.391-3.310.1243.0968.1627.36833.98
115CC_C70U71:A78G79_CC-0.425-2.0933.467-3.5912.68531.015-5.580.1782.47822.496.36533.637
11CC_G21U22:A49U50_CC-0.425-0.993.146-6.37213.59437.512-2.858-0.0492.67920.1789.45840.304
16CC_G29C30:G39C40_CC-0.935-1.7893.231-4.537-0.45632.599-3.080.8683.351-0.8088.03332.908
111CC_G53G54:C60C61_CC-0.45-1.6832.797-7.781-1.56235.314-2.518-0.2412.898-2.53612.6336.167
112CC_G54C55:G58C60_CC-0.896-0.5762.8997.7855.6117.901-3.6865.3882.06116.573-22.99720.292
12CC_U22U23:A48A49_CC0.268-0.673.0071.9476.59133.793-2.055-0.1782.8411.195-3.30734.464
13CC_U23U24:A47A48_CC-0.798-0.5614.061-5.69625.39234.047-3.9050.3953.05137.3558.3842.617
14CC_U24U25:A46A47_CC0.494-1.0762.8553.319-1.14831.904-1.765-0.3652.926-2.08-6.01632.091
15CC_U25A26:U45A46_CC-0.668-1.63.5041.33911.75530.319-4.8781.4242.68321.476-2.44732.496
18CC_U31A32:U37A38_CC0.717-1.2292.8832.3066.89435.8-2.776-0.8722.64911.074-3.70436.507
116CC_U71U72:A77A78_CC-0.198-1.7433.1944.6881.8432.393-3.3921.1243.0353.274-8.3432.772
117CC_U72G73:A76A77_CC-0.979-0.8663.0381.3548.461104.354-0.6560.6362.9755.35-0.856104.602

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.