A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Sep-2017 number of released structures: 9117
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NDB ID: 5VXQ  PDB ID: 5VXQ 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11AA_A2A3:A13A12_BB0.1331.6683.479-6.241-4.9232.2923.76-1.3023.119-8.68211.01433.23
12AA_A3A4:A14A13_BB-0.1150.5133.8540.4694.905-138.101-0.308-0.0583.845-2.6260.251-138.141
13AA_A4A5:A15A14_BB-0.457-0.2133.7471.626-0.95-138.4310.12-0.2343.7480.5080.87-138.437
14AA_A5DA6:A16A15_BB0.212-0.5383.795-2.0371.005-136.7440.2820.13.799-0.54-1.096-136.753
16AA_A7A8:A18DA17_BB-0.1520.0543.8131.0530.72344.872-0.0060.3113.8090.947-1.37944.889
17AA_A8A9:A19A18_BB-0.252-0.0353.8350.858-0.201-138.2220.02-0.1293.8360.1070.459-138.224
18AA_A9A10:A20A19_BB-0.3550.173.7970.0460.802-138.222-0.096-0.193.797-0.4290.024-138.223
19AA_A10A11:A21A20_BB-0.089-0.0623.555-0.648-1.10239.370.0490.0493.557-1.6350.96239.39
15AA_DA6A7:DA17A16_BB0.21-0.4253.773-0.3190.14341.165-0.623-0.3393.770.2030.45441.166

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.