A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5W0U  PDB ID: 5W0U 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15DD_DA5DA6:DT7DT8_GG0.023-0.9083.2811.3673.50127.231-2.760.2833.1397.391-2.88527.485
16DD_DA6DG7:DC6DT7_GG0.313-0.513.401-0.5641.42630.245-1.274-0.7183.3672.7311.08130.283
111DD_DA11DG12:DC1DT2_GG0.424-0.7013.166-4.824-8.31935.590.004-1.3163.163-13.3137.7236.826
14DD_DC4DA5:DT8DG9_GG-0.4550.7523.384-1.2032.93340.2490.7450.5193.4394.2551.74540.368
19DD_DC9DC10:DG3DG4_GG-0.122-0.6233.217-1.051-0.37234.862-0.9840.0463.226-0.6211.75334.879
110DD_DC10DA11:DT2DG3_GG-0.903-0.1233.296-1.593-3.02634.620.2631.2633.331-5.0692.66934.783
11DD_DG1DT2:DA11DC12_GG0.116-1.4143.3183.753-0.58537.885-2.0930.3083.335-0.898-5.76238.068
17DD_DG7DG8:DC5DC6_GG0.319-0.0943.19-8.8-6.28235.3210.674-1.6583.001-10.06614.10136.889
18DD_DG8DC9:DG4DC5_GG-0.891-0.8863.463-2.2870.52736.267-1.4991.093.4980.8463.66936.34
12DD_DT2DT3:DA10DA11_GG0.0-0.3643.3256.292-2.40138.399-0.250.7773.3-3.616-9.47738.963
13DD_DT3DC4:DG9DA10_GG-0.104-0.6573.376-1.7420.55530.219-1.374-0.1643.3641.0633.33830.273

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.