A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Jul-2018 number of released structures: 9608
Search for released structures

NDB ID: 5W4U  PDB ID: 5W4U 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
17T_6MA7:DT8_N120
13T_DA3:DT12_N120
19T_DA9:DT6_N00
110T_DA10:DT5_N120
113T_DA13:DT2_N120
122T_DA27:U2_R00
11T_DC1:DG14_N119
14T_DC4:DG11_N00
15T_DC5:DG10_N10
112T_DC12:DG3_N10
115T_DC20:G9_R119
116T_DC21:G8_R119
118T_DC23:G6_R119
120T_DC25:G4_R119
121T_DC26:G3_R119
16T_DG6:DC9_N10
111T_DG11:DC4_N10
114T_DG14:DC1_N119
12T_DT2:DA13_N120
18T_DT8:DA7_N120
117T_DT22:A7_R120
119T_DT24:A5_R120
123T_DT28:A1_R120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)