A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 19-Sep-2018 number of released structures: 9779
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NDB ID: 5W51  PDB ID: 5W51 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
17TT_6MA7DT8:DA7DT8_NN-0.273-0.1893.2336.663-12.76232.9351.5131.3932.992-21.288-11.11535.864
13TT_DA3DC4:DG11DT12_NN-0.4931.3512.5077.24-17.85837.1713.1561.2031.604-25.988-10.53641.712
19TT_DA9DA10:DT5DT6_NN2.478-0.072.746-2.557-14.0338.6251.156-3.762.463-20.3843.71641.079
110TT_DA10DG11:DC4DT5_NN-0.716-0.1383.441-4.7576.11833.346-1.2620.4183.4310.4868.15434.209
113TT_DA13DT15:DC1DT2_NN0.550.8546.17711.1162.2360.1530.6380.476.2082.203-10.98461.113
121TT_DA27DT28:A1U2_RR-0.184-1.4213.0121.6697.44226.152-4.6240.752.50216.018-3.59327.223
11TT_DC1DT2:DA13DG14_NN-0.9780.3413.1034.1333.42327.247-0.0592.9682.9457.177-8.66727.761
14TT_DC4DC5:DG10DG11_NN0.6940.5962.9543.0230.29434.7870.953-0.743.0070.491-5.04534.916
15TT_DC5DG6:DC9DG10_NN-0.3980.1954.002-3.68626.10333.545-3.1030.0733.34138.6785.46142.429
112TT_DC12DA13:DT2DG3_NN-1.746-0.2843.17714.725.94937.93-0.9723.8952.3058.702-21.53141.006
114TT_DC20DC21:G8G9_RR-0.294-1.32.7630.4110.91220.399-6.0870.8421.8328.338-1.06523.11
115TT_DC21DT22:A7G8_RR1.012-2.1973.7723.5982.10528.68-4.925-1.1113.7014.221-7.21628.975
117TT_DC23DT24:A5G6_RR-0.171-1.6262.9887.497-6.32625.444-1.9222.1763.12-13.73-16.27127.24
119TT_DC25DC26:G3G4_RR0.172-2.1483.123.4665.41322.833-6.8110.5942.54813.338-8.53923.709
120TT_DC26DA27:U2G3_RR-0.168-0.5563.7499.1398.79445.095-1.5271.0713.49311.207-11.64646.754
16TT_DG66MA7:DT8DC9_NN0.833-0.0242.901-11.637-9.90338.9270.86-2.222.497-14.21216.741.711
111TT_DG11DC12:DG3DC4_NN0.95-1.3493.729-1.145-5.37726.766-1.284-2.3473.877-11.4622.4427.315
12TT_DT2DA3:DT12DA13_NN0.535-0.5654.0533.7115.65943.588-1.41-0.2823.9837.567-4.96244.085
18TT_DT8DA9:DT6DA7_NN-1.9590.4433.119-1.00210.28227.025-1.3743.7063.14221.0512.05128.898
116TT_DT22DC23:G6A7_RR-0.002-1.9593.723-5.7854.46732.965-4.172-1.0293.3877.75410.04233.744
118TT_DT24DC25:G4A5_RR1.803-1.5473.444.5321.69435.896-2.745-2.2163.562.733-7.31336.21

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.