A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-May-2020 number of released structures: 10752
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NDB ID: 5WNV  PDB ID: 5WNV 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13AA_A10G11:C23U24_AA-0.56-1.6693.210.4329.16931.137-4.4551.0722.61816.633-0.78432.429
131AA_A32A33:U551U552_AA-0.093-0.8613.0641.4871.99934.858-1.7150.3643.0053.332-2.47934.944
132AA_A33C34:G550U551_AA-0.17-1.4933.38-0.1499.58837.125-3.4520.2412.9214.760.2338.301
141AA_A55G57:C355U368_AA5.319-0.7515.651-8.494-0.198171.098-0.376-2.6845.62-0.0994.26171.123
142AA_A60G61:C106G107_AA-2.69-2.4253.16182.495-123.284122.031-0.5741.7913.034-63.221-42.304164.808
158AA_A109A327:U323G324_AA-1.617-0.4122.749-6.021-3.552-2.3999.181-22.693-0.62236.117-61.221-7.39
179AA_A119C240:G286U287_AA1.241-2.0343.243-4.9932.55592.699-1.451-0.9483.1451.7643.44892.83
1100AA_A140A141:U222U223_AA0.635-1.5353.069-0.4066.97428.185-4.416-1.3452.61314.050.81829.021
1101AA_A141G142:C221U222_AA0.05-2.1453.6584.9236.56930.231-5.2820.8863.10412.313-9.22731.301
1103AA_A143G198:C219G220_AA-3.111-3.4353.2517.835-1.39135.243-5.3636.0322.651-2.263-12.7436.102
1117AA_A162C163:G158G159_AA3.389-0.4931.91711.5230.10549.007-0.586-3.4112.60.124-13.67350.262
1126AA_A171A172:A149C150_AA0.813-0.483.1894.955-3.50426.985-0.148-0.493.317-7.391-10.45127.647
1127AA_A172C174:G148A149_AA3.774-2.1993.2375.101-1.62769.758-1.859-3.1053.515-1.421-4.45369.938
1133AA_A179U180:A195A196_AA-1.669-0.7693.216-14.79-6.76936.69-0.2670.5663.679-10.16322.20440.02
184AA_A243A246:G281A282_AA4.8680.2293.697.732-10.5126.07416.677-7.8414.007-52.478-38.59914.388
159AA_A327A329:C322U323_AA-0.126-1.9153.248-6.1920.10540.622-2.741-0.493.2280.158.85741.071
160AA_A329G332:A321C322_AA2.826-1.7393.3462.388-5.13676.728-1.243-2.23.512-4.132-1.92276.905
167AA_A338C339:G350G351_AA0.822-0.9642.971-4.57510.4828.213-3.603-2.3382.31520.4688.93530.399
1149AA_A373G450:C483G481_AA2.0340.122-5.03417.106-0.75422.0240.011-9.715-2.767-1.685-38.20727.832
1170AA_A383G384:C379G380_AA2.89-1.2482.8597.1437.10454.642-1.716-2.7273.0157.666-7.70855.492
1175AA_A389C390:G371U375_AA6.463-0.0123.662-2.057-23.93688.410.519-4.5783.468-16.9091.45390.961
1179AA_A393G394:C366U367_AA3.293-3.1263.047-5.4710.0339.725-14.68-14.093-1.30643.66123.80614.994
1165AA_A408G409:C433U434_AA0.32-1.6173.3361.76413.05838.243-3.735-0.2762.67719.247-2.640.369
1169AA_A411G413:G428A430_AA2.229-2.6563.0280.664-7.668108.65-1.541-1.3623.161-4.716-0.409108.836
1194AA_A452A453:C479U480_AA0.137-1.1413.469-10.77-1.51736.86-1.535-1.6393.343-2.33816.59438.378
1195AA_A453C454:A478C479_AA1.458-1.0512.7288.7865.03930.004-2.742-1.2572.8239.403-16.39431.63
1153AA_A487C488:G446G447_AA-0.023-0.6213.1194.1513.1763.022-0.7260.1963.0813.027-3.96463.216
1162AA_A496G406:C436U437_AA3.332-1.3243.4570.125-0.56872.061-1.105-2.8273.471-0.482-0.10672.063
1161AA_A497A496:U437G438_AA-1.463-0.9293.257-10.3983.55310.751-6.678-3.8993.05614.79443.29715.361
1217AA_A563G567:C883U884_AA-0.829-3.2610.708113.821-121.86143.577-0.981.0331.95-63.968-59.748167.699
1231AA_A583G584:U757G758_AA-0.012-0.8153.153-7.4863.66453.124-1.121-0.4343.0714.0698.31253.727
1285AA_A611C612:G628G629_AA0.614-1.6583.719-2.22811.21439.326-3.685-1.1393.11316.253.22940.891
1288AA_A614C615:G625U626_AA0.113-1.2823.0752.4775.28833.912-2.920.1622.858.984-4.20834.397
1234AA_A632G633:U605G606_AA0.428-0.5173.629-4.76311.18453.635-1.29-0.7753.4212.2185.20354.895
1242AA_A640C643:G597U598_AA-4.21-0.9763.41224.6567.02167.693-1.0314.2881.8846.085-21.37171.84
1248AA_A648G649:C590U591_AA0.327-1.8363.3031.056.22924.583-5.878-0.4572.77114.33-2.41525.37
1254AA_A655C656:G750U751_AA0.385-1.8923.0672.481-1.34230.967-3.284-0.2643.164-2.507-4.63531.092
1262AA_A663G664:G741G742_AA-0.161-1.6333.2463.415-2.09329.014-2.7751.0613.313-4.153-6.77629.283
1273AA_A675A676:G714A715_AA0.285-1.0333.426-0.3058.4837.391-2.653-0.4733.12413.0230.46938.308
1274AA_A676U677:G713G714_AA0.128-0.9992.722-4.2935.91522.139-4.076-1.482.31514.8910.80923.3
1282AA_A684G685:U705A706_AA-0.89-0.7213.383.08813.89954.354-1.5651.1243.07514.929-3.31756.05
1295AA_A722G724:A665A733_AA-4.1111.06-0.127-145.767-101.251-120.37-0.653-1.879-1.48850.72-73.021-178.748
1252AA_A753G654:C754U652_AA-2.522-2.77-2.215155.707-46.183-94.4571.24-1.782-0.53523.7580.073-168.082
1303AA_A768G769:C810C811_AA-0.257-1.2873.894-1.9567.90949.595-2.1780.143.6689.3552.31350.218
1311AA_A780A781:U801A802_AA-5.097-0.5143.408-7.418.012-5.007-2.11-28.596-1.378-48.032-44.424-12.004
1312AA_A781A782:G800U801_AA5.939-1.32.9470.17814.19937.507-3.265-8.6622.3521.176-0.26540.015
1313AA_A782C783:G799G800_AA0.739-0.7663.607-4.0187.46964.39-1.054-0.8723.4626.9773.75464.887
1328AA_A860G861:C868G869_AA0.278-0.8713.1811.7675.59958.504-1.166-0.1963.15.713-1.80358.772
1334AA_A889U891:A907A908_AA2.344-2.1360.413122.169124.451-170.9031.0571.1830.402-62.23261.091-179.556
1336AA_A892C893:U244G906_AA-3.678-1.5232.409-1.8798.99428.323-4.2916.8882.07317.7983.71829.747
16AA_A914A915:U13G21_AA-2.205-1.8763.1814.3857.3582.569-18.06117.737-1.7162.997-37.5448.942
17AA_A915G916:C19U13_AA3.786-1.6614.106-16.10310.46486.19-1.455-3.1253.3267.57811.66287.892
110AA_A918A919:A16U17_AA0.647-1.5453.4545.2032.09637.609-2.655-0.2933.4223.23-8.01538.01
111AA_A919U920:G15A16_AA-1.228-1.9613.478-2.3665.11431.79-4.4631.7763.2129.2444.27632.273
115AA_A923C924:G1392U1393_AA0.333-0.9912.9685.51310.57231.857-3.1710.1992.54118.472-9.63233.961
125AA_A935C936:G1379U1380_AA0.303-2.1412.884-1.1874.51825.449-5.816-0.9482.45610.1472.66725.868
1364AA_A978A1319:U1315G1316_AA-3.589-2.295-2.563156.954-54.603-3.1281.156-1.8072.56429.5184.824-166.186
1379AA_A986G987:C1218U1219_AA0.902-1.1483.1251.1098.49330.502-3.539-1.4662.74415.756-2.05831.654
1385AA_A1046G1047:C1210U1211_AA2.01-1.5943.288-9.4127.43851.157-2.254-2.8442.6658.48110.73152.453
1391AA_A1055U1056:A1204C1200_AA0.339-4.0283.49319.348.008-15.3426.1687.5633.066-20.71450.029-25.902
1439AA_A1123G1124:C1149U1150_AA-1.117-0.1823.542-1.12517.84627.753-3.6121.7632.93933.1982.09332.92
1445AA_A1157C1158:G1181G1178_AA-3.5565.486-3.299-21.2375.36828.0439.427.4640.2769.46237.43935.449
1433AA_A1179C1118:G1155G1156_AA2.8071.6461.28-122.537125.95367.8370.566-1.6550.0763.65361.927176.453
1351AA_A1225C1226:G954U955_AA-1.252-0.5152.9010.13813.20841.092-1.8291.7162.61918.256-0.1943.075
1354AA_A1229C1230:G951U952_AA-0.467-1.6572.926-0.164-1.31327.824-3.1570.9343.002-2.7290.3427.855
1361AA_A1236C1237:G1337G945_AA0.6150.282.8212.216-0.01419.3220.836-0.8682.872-0.043-6.57419.448
1453AA_A1238G1241:C1296U1301_AA0.0620.537.244-5.475-146.60518.7893.765-0.1630.709-87.1453.255147.167
1458AA_A1245C1246:G1291U1292_AA0.102-1.2263.034-0.8348.38434.584-3.089-0.2752.6713.851.37835.565
1461AA_A1248C1249:A1288A1289_AA-0.914-0.42.8461.121-1.82620.332-0.423.0092.816-5.153-3.16320.443
1365AA_A1319G1323:C1314U1315_AA3.342-1.3933.196-1.7632.24770.49-1.282-2.9533.0821.9461.52770.54
1367AA_A1324C1325:G1312U1313_AA0.882-1.7513.3492.456-0.15434.908-2.888-1.0843.409-0.256-4.08934.992
1372AA_A1329U1330:U1307U1308_AA0.359-1.4282.915-0.5051.73235.749-2.543-0.6482.8392.8190.82135.793
1375AA_A1332A1333:G1304G1305_AA-0.8460.2062.716-13.512.29135.928-0.947-0.1382.77618.52620.34940.164
1376AA_A1333G1334:C1303G1304_AA0.422-0.6373.555-7.5827.78563.284-0.958-0.7463.47.3627.1764.115
1342AA_A1339A1340:U943G944_AA1.633-0.8323.6361.58310.3358.195-1.425-1.5683.49610.527-1.61459.045
1343AA_A1340U1341:G942U943_AA1.162-1.7773.2734.831-3.64834.714-2.366-1.1653.561-6.057-8.02135.222
1471AA_A1349A1350:U1372G1373_AA-0.187-0.5853.388-3.5616.96461.626-0.8970.0123.3166.7693.46162.072
1472AA_A1350U1351:G1371U1372_AA0.347-1.1022.9791.5687.41237.002-2.548-0.3582.72711.531-2.4437.743
1479AA_A1357U1358:A1363G1365_AA0.2120.333.9419.43424.482105.674-0.1810.1743.93915.15-12.026108.853
1492AA_A1413U1414:G1486G1487_AA0.568-1.5892.9911.135-0.06631.921-2.877-0.8433.012-0.12-2.06331.94
1497AA_A1418G1419:U1481G1482_AA0.816-0.5213.462-1.73712.92855.791-1.283-0.9513.25413.6091.82957.176
1507AA_A1428C1429:G1471U1472_AA0.299-1.4363.0971.3679.28633.487-3.672-0.3152.62715.736-2.31634.741
1512AA_A1434G1435:C1466G1467_AA-0.423-0.2243.6751.89211.95855.356-0.9850.5653.54612.702-2.0156.562
1215Aa_A1492A2:U35G530_bA1.5261.9935.86891.107-70.621105.3282.0820.524.925-38.754-49.996142.112
1484AA_A1499A1500:4OC1402C1403_AA-1.571-1.0113.494-6.692-3.36746.186-0.9621.363.735-4.2598.46546.757
1485AA_A1500C1501:G14014OC1402_AA-1.428-1.8333.321-4.2952.92239.485-3.0361.593.3144.3026.32539.812
1523AA_A1507G1508:C1527U1528_AA0.815-0.6682.698-7.1519.97429.813-2.571-2.4492.12518.43313.21532.187
1529AA_A1513C1514:G1521U1522_AA-0.379-0.9653.009-1.5895.45330.583-2.7370.4352.81410.2272.9831.093
133AA_C34G35:C549G550_AA-0.817-1.6643.044-4.17810.34330.019-4.6420.8282.4419.1577.73831.98
135AA_C36U37:A397G548_AA-0.619-2.1223.1584.43-2.706114.701-1.2310.4143.173-1.607-2.63114.776
145AA_C63G66:C103G104_AA-2.964-1.8273.576-4.46514.29153.723-2.8422.9013.24915.4784.83655.621
147AA_C67G68:A101G102_AA-1.148-1.7883.05610.09-1.6127.376-3.2364.2332.577-3.262-20.43829.186
151AA_C73C74:G96G97_AA-0.104-1.513.0780.80811.77630.191-4.4940.3092.33721.599-1.48232.367
152AA_C74G75:U95G96_AA0.858-2.2073.3170.2213.55120.35-8.677-1.9731.56733.923-0.55124.41
154AA_C76G77:C92G93_AA0.082-1.7623.8410.7298.53328.894-5.310.0053.20216.645-1.42230.11
186AA_C123G124:C237G238_AA-0.082-1.663.286-1.47515.43132.459-4.681-0.0562.2925.8482.47135.881
193AA_C131C132:G230G231_AA-0.79-1.8763.452-0.9813.27623.997-5.5291.5643.27.8282.34524.236
194AA_C132U133:U229G230_AA0.536-1.5213.335-2.637.83536.562-3.364-1.1692.91512.2964.12837.454
196AA_C136C137:G226G227_AA-0.17-1.8283.5941.2866.62233.677-4.1810.4993.1811.289-2.19234.327
197AA_C137G138:C225G226_AA-0.677-1.7453.469-1.47712.2126.556-5.991.0362.47624.9493.01929.22
1118AA_C163U164:G157G158_AA0.029-1.6873.3272.9325.59733.833-3.7050.3983.0099.515-4.98534.401
1120AA_C165G166:C155G156_AA-0.198-1.7763.539-0.40113.88126.268-6.2610.3052.32828.1760.81429.656
1124AA_C169U170:A151A152_AA-1.111-2.4873.6471.6499.29747.155-3.8181.53.09411.487-2.03848.038
1128AA_C174C175:G147G148_AA0.22-1.7423.41-0.0223.05435.589-3.291-0.3613.2544.9860.03635.716
1129AA_C175C176:G146G147_AA-0.136-2.0453.4442.6720.92927.724-4.4770.9473.3481.932-5.55927.865
1130AA_C176C177:G145G146_AA-0.414-1.9333.526-5.473.56230.546-4.307-0.3283.3076.66510.23631.22
1131AA_C177C178:G144G145_AA-0.147-1.7542.8632.135.48727.941-4.5850.6982.46211.207-4.35128.542
1132AA_C178A179:A196G144_AA-1.679-4.7913.826-10.34532.1892.812-3.7420.9392.60821.6676.96597.436
1116AA_C193C194:G183G184_AA-0.502-1.5943.364-5.3549.36432.63-4.1350.0312.85616.1269.2234.32
180AA_C240C241:G285G286_AA-0.412-1.8033.371-0.5158.36330.539-4.7920.6642.79815.5140.95531.641
181AA_C241C242:G284G285_AA-0.189-1.8263.1211.068.51330.82-4.6730.5132.53215.642-1.94731.964
182AA_C242C245:C283G284_AA-0.585-1.3253.4371.9226.7357.667-1.7320.7083.2586.95-1.98558.054
183AA_C245A243:A282C283_AA-2.571-0.983.0633.3751.8623.953-17.01739.0920.29221.397-38.7845.521
1135AA_C248U249:G275G276_AA0.21-1.8123.4072.7793.94537.711-3.2930.0373.2156.072-4.27838.007
177AA_C290C291:G309G310_AA0.722-1.9293.2955.6368.65529.432-5.154-0.3272.72116.412-10.68731.154
178AA_C291G292:C308G309_AA-0.149-1.7493.7530.7712.69833.88-4.7160.3562.92720.897-1.26736.124
1147AA_C295U296:G301G302_AA0.398-1.3413.3680.1462.84337.757-2.438-0.5953.2644.386-0.22537.86
163AA_C334C335:G318G319_AA-0.312-1.6553.372-0.16410.19428.627-5.1040.5642.64119.8390.3230.352
164AA_C335C336:G317G318_AA-0.398-1.733.109-0.56210.430.07-4.810.6372.39919.3311.04531.784
165AA_C336C337:G316G317_AA0.374-1.7093.4010.80616.37338.042-4.082-0.4482.49723.815-1.17341.303
166AA_C337A338:G351G316_AA-0.403-1.8843.2751.17213.97635.814-4.4340.7442.38821.728-1.82238.378
168AA_C339U340:A349G350_AA-0.486-1.543.286-4.10110.25129.536-4.6360.1762.65819.2797.71331.489
170AA_C341C342:G347G348_AA-0.572-2.0313.556-0.4054.40726.848-5.4681.1113.1959.4110.86627.204
171AA_C342U343:G346G347_AA-0.712-0.7663.51310.8611.80497.329-0.710.6593.3597.821-7.19698.311
1172AA_C385C386:G377G378_AA0.418-1.6823.243-0.29714.5632.681-4.616-0.7192.30624.4210.49835.698
1173AA_C386U387:G376G377_AA0.556-1.8763.4760.0668.43532.627-4.603-0.9492.91514.71-0.11633.671
1176AA_C390G391:C370G371_AA-0.181-1.3243.426-1.52211.27531.553-4.1230.0672.80719.9422.69133.492
1181AA_C395G396:U45G46_AA0.057-1.3082.9140.16918.23331.632-4.105-0.0731.90530.488-0.28236.394
1183AA_C398G399:C43G44_AA-0.835-1.9453.459-4.90810.44126.874-6.0680.6172.64421.2639.99529.204
1185AA_C400C401:G41G42_AA0.4-1.3213.0693.4426.60632.659-3.28-0.182.78211.561-6.02333.475
1186AA_C401G402:C40G41_AA-0.236-1.6453.721-2.21911.52327.117-5.79-0.0292.81323.2424.47629.503
1188AA_C403U404:U498G39_AA-1.143-3.3613.484-0.64313.3465.331-3.5821.0162.83912.2240.5966.534
1191AA_C417C418:G425G426_AA-0.218-2.2113.547-3.5676.43330.335-5.36-0.2873.03112.0716.69431.194
1192AA_C418C419:G424G425_AA0.449-2.0483.0848.9780.11928.636-3.9830.9173.0720.234-17.61329.982
1193AA_C419U420:G423G424_AA-1.238-0.813.5611.00210.133101.98-0.6760.9643.3876.496-7.053102.768
1151AA_C449U486:A448G484_AA2.002-2.3-0.731126.722116.634-38.0961.3680.77-0.159-60.08965.286-172.653
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1413AA_G1011U1012:G1017C1018_AA0.287-0.9262.874-1.2427.26340.115-2.014-0.5292.66310.4821.79340.759
1386AA_G1047G1048:C1209C1210_AA0.366-2.1743.6246.54312.6530.995-5.7260.4152.58922.258-11.51234.037
1387AA_G1048G1050:C1208C1209_AA-1.149-1.3963.831-7.526.33637.59-3.0070.6533.719.63311.43238.81
1388AA_G1050C1051:2MG1207C1208_AA-0.677-1.6072.971-2.2412.28632.429-3.2220.8562.8934.0814.032.582
1393AA_G1057G1058:U1199C1203_AA4.080.4242.987-6.02214.20662.974-0.13-4.0382.66113.3875.67464.648
1394AA_G1058C1059:G1198U1199_AA0.74-0.8132.9360.69210.46634.755-2.578-1.1052.60417.047-1.12736.256
1397AA_G1061U1062:U1194C1195_AA0.282-0.6633.6271.6438.96245.322-1.682-0.2063.45111.493-2.10746.182
1400AA_G1064C1066:A1191C1192_AA-2.642.0120.626-126.4-121.855-162.835-0.975-1.3520.54460.945-63.218-179.339
1416AA_G1068C1069:G1106C1107_AA-0.126-1.6243.130.6862.25435.36-2.9790.3023.0213.706-1.12835.436
1420AA_G1072U1073:A1102C1103_AA0.361-1.2113.1243.47714.04535.055-3.483-0.1562.49922.185-5.49337.837
1422AA_G1074C1075:G1082U1083_AA-0.16-1.2063.066-1.3213.57941.899-2.0220.0972.9614.9921.84342.065
1426AA_G1087G1088:C1097C1098_AA-0.455-1.3063.127-1.01212.92636.564-3.3880.5762.5519.8521.55438.721
1427AA_G1088G1089:C1096C1097_AA0.091-1.823.5020.7512.18630.778-5.2-0.0372.61421.909-1.34833.057
1428AA_G1089U1090:U1095C1096_AA0.667-1.0752.815-6.9155.65440.202-2.033-1.5662.5048.1049.91241.142
1436AA_G1120U1121:A1152C1153_AA-0.535-1.4573.196-1.794.4734.046-3.130.6393.017.5873.03934.374
1440AA_G1127C1128:G1143C1145_AA0.705-0.3884.545-22.59513.01531.246-2.491-4.3683.03320.3135.25940.488
1443AA_G1133G1134:C1140C1141_AA0.354-1.8533.287-3.1588.19931.017-4.699-1.1622.67414.9595.76232.208
1444AA_G1134U1135:G1138C1140_AA-0.109-1.5812.965-3.4255.1111.955-1.0060.032.9183.0752.065112.066
1447AA_G1160C1161:G1175A1176_AA1.028-1.9763.234-1.0922.68138.435-3.313-1.6883.0654.0661.65538.54
1451AA_G1164C1165:G1171C1172_AA0.403-1.4893.132.8485.10431.459-3.558-0.2542.8849.312-5.19731.983
1356AA_G1231U1232:A949U950_AA-0.168-1.4813.127-3.2823.36439.025-2.578-0.1172.9975.0134.89239.296
1358AA_G1233C1234:G947C948_AA-0.587-1.2473.085-3.9322.60437.859-2.2170.4313.0393.9956.03138.141
1454AA_G1241C1242:G1295C1296_AA-0.465-1.6623.059-2.8295.40933.435-3.6250.3882.7939.3054.86733.972
1462AA_G1253C1254:G1283C1284_AA0.155-1.6783.4940.7240.67134.768-2.916-0.1413.4651.122-1.21234.781
1464AA_G1258C1259:G1276C1277_AA-0.57-1.1463.128-3.6996.03431.403-3.0760.4112.9110.9746.72832.171
1366AA_G1323A1324:U1313C1314_AA-0.285-0.9953.018-2.0316.94933.019-2.720.1972.7712.0463.52233.781
1374AA_G1331A1332:G1305A1306_AA-1.115-2.3134.849-0.849-13.487-21.53410.252-2.8512.87232.32-2.035-25.381
1346AA_G1343C1344:G939C940_AA0.169-0.9512.9060.1638.70334.466-2.646-0.2572.59714.405-0.27135.516
1475AA_G1353C1354:G1368C1369_AA-0.43-1.8913.27-1.7880.49937.323-3.0170.4363.2620.7792.79237.368
1477AA_G1355G1356:C1366C1367_AA0.071-1.1743.4271.0695.01935.75-2.6210.043.2388.124-1.7336.105
1478AA_G1356A1357:G1365C1366_AA-1.113-0.793.0954.535-0.03537.526-1.2152.262.946-0.055-7.01737.789
1489AA_G1410C1411:G1489C1490_AA-0.516-1.3542.897-3.1194.73932.845-3.0440.4512.7178.3045.46633.318
1494AA_G1415G1416:C1484U1485_AA-0.765-1.7293.418-4.735.10936.865-3.3760.5563.2297.9927.39837.495
1495AA_G1416G1417:A1483C1484_AA-0.894-0.8863.4041.0299.96266.076-1.2070.8543.2449.082-0.93866.746
1496AA_G1417A1418:G1482A1483_AA0.468-1.1263.159-0.3710.791-24.7992.3870.9813.2-1.842-0.863-24.814
1498AA_G1419C1420:G1480U1481_AA0.022-1.263.056-0.5622.9638.288-2.255-0.0982.9534.5040.85538.401
1500AA_G1421G1422:C1478C1479_AA0.513-1.3543.4172.73211.48342.306-2.905-0.4272.99515.551-3.743.848
1501AA_G1422G1423:C1477C1478_AA-0.746-1.7753.2091.3565.9321.069-6.742.4362.56615.797-3.61321.92
1502AA_G1423C1424:G1476C1477_AA-0.419-1.5373.072-2.306-2.81231.263-2.3270.3573.216-5.1954.26231.468
1511AA_G1432A1434:G1467A1468_AA-1.373-0.2655.19.33819.4292.791-11.0558.617-0.16874.548-35.82921.734
1513AA_G1435U1436:C1465C1466_AA-2.163-0.8872.9760.8838.66428.84-3.2364.322.54216.915-1.72430.1
1516AA_G1438C1439:G1462C1463_AA-0.008-1.5853.1090.1415.24235.043-3.3110.0312.858.646-0.23335.421
1519AA_G1441G1447:C1459A1460_AA-3.8391.2963.3163.7245.62237.7171.286.3143.0928.611-5.70538.294
1520AA_G1447C1448:G1455C1459_AA-0.362-1.7493.028-1.6042.05433.256-3.3590.3872.9323.5832.79733.355
1480AA_G1494U1495:U14065MC1407_AA-1.567-2.1443.805-0.9284.61444.752-3.2741.9523.6086.0411.21544.987
1483AA_G1497A1499:C14035MC1404_AA0.099-3.2963.8110.0813.82125.675-8.49-0.1973.2948.538-0.1825.953
1487AA_G1504G1505:A1502C1399_AA-5.254-0.6010.49684.396-112.62416.864-1.0672.224-2.56-69.626-52.175141.179
1524AA_G1508C1509:G1526C1527_AA0.451-1.5123.2381.8932.3234.012-2.935-0.4753.153.957-3.22834.139
1527AA_G1511U1512:G1523C1524_AA0.535-1.0333.2341.69814.06838.756-2.903-0.5882.73420.388-2.46141.171
15AA_U12A914:G21G22_AA-2.197-3.0593.306-8.7948.4135.606-21.1011.0680.90745.18247.22813.395
130AA_U30A32:U552A553_AA-0.398-1.0473.3241.67115.27532.107-3.8350.8842.55825.85-2.82935.507
136AA_U49G361:C47U365_AA-2.048-2.925-1.124-94.361147.99-112.9241.629-0.918-0.183-74.31-47.381-177.522
144AA_U62C63:G104G105_AA-0.068-1.8362.6931.86112.28224.857-5.8910.4541.61326.521-4.01827.744
174AA_U114G115:C312A313_AA-0.944-0.9452.870.04514.5737.174-2.7841.392.35121.854-0.06839.833
188AA_U125G126:C235G236_AA0.696-1.9293.05110.75112.91718.526-7.6131.0111.5832.698-27.21624.963
192AA_U129C131:G231G232_AA-0.69-1.6723.00212.9391.05235.581-2.6992.5282.5581.655-20.35637.803
195AA_U133C136:G227U229_AA-2.818-0.0366.8755.96915.02177.437-0.8852.5596.58711.886-4.72378.846
1119AA_U164C165:G156G157_AA-0.289-2.0563.282.0384.43123.466-6.3051.3182.81410.747-4.94223.961
1125AA_U170A171:C150A151_AA-0.7490.1363.297-2.078-1.2147.484.804-1.063.316-9.00315.4117.857
1111AA_U190JG190K:C188G189_AA-0.583-1.4952.981.0913.23125.41-5.4241.3771.9527.792-2.2928.618
1113AA_U190LG191:C186C187_AA1.636-1.373.202-5.70514.52331.439-4.142-3.4522.0724.9699.80835.01
1115AA_U192C193:G184A185_AA0.278-1.3643.3272.2267.72736.473-3.131-0.1462.99712.164-3.50437.32
1136AA_U249U252:A274G275_AA2.443-0.3176.75520.298-106.39424.7094.052-0.682.505-79.775-15.22110.218
1137AA_U252U253:A273A274_AA-0.671-1.5943.449-9.80626.87236.81-4.1840.0662.01436.56113.34246.312
1138AA_U253G254:C272A273_AA0.422-1.7233.4714.07410.41229.542-5.077-0.0312.75319.559-7.65331.543
1141AA_U256G257:C269A270_AA0.511-1.2262.935-0.93510.29232.404-3.483-1.0012.42917.8831.62533.97
1146AA_U294C295:G302A303_AA-0.566-1.4783.389-2.88214.03433.655-4.2230.5222.62522.9894.72136.496
169AA_U340C341:G348A349_AA0.005-1.5823.421-0.4175.15535.518-3.314-0.0693.1678.3950.67935.881
139AA_U358G357:C54A53_AA1.1982.597-3.0938.139-2.592-24.703-6.4280.512-3.0425.8418.339-26.116
138AA_U359U358:A53G52_AA-0.1821.299-3.131-3.166-6.436-40.506-2.4990.06-2.9069.209-4.53-41.11
1174AA_U387A389:U375G376_AA-1.926-1.2293.2735.3074.76334.546-2.6893.9162.7687.916-8.82135.252
1189AA_U404U405:A499U498_AA0.139-1.5843.114-1.77817.8930.299-4.841-0.451.90331.0343.08435.124
1168AA_U429A411:A430A431_AA2.992-3.264-0.119154.93962.267179.489-1.632-1.496-0.11231.134-77.47179.942
1152AA_U486A487:G447A448_AA5.281-1.3163.784-3.804-6.09-12.64112.17716.5244.12125.172-15.723-14.53
1160AA_U495A497:G438A439_AA5.3-0.4423.91516.156-7.15218.3152.758-3.5546.301-17.942-40.52725.395
1207AA_U512C513:G538A539_AA-0.193-1.3263.351-3.3179.74134.791-3.466-0.1432.89315.8665.40336.236
1238AA_U636G637:C601A602_AA-0.357-1.2923.3511.00216.38831.152-4.430.7322.38528.196-1.72335.119
1246AA_U646C647:G592G593_AA0.31-1.5233.0863.49510.90731.337-4.244-0.0322.45319.4-6.21633.316
1258AA_U659G660:C745A746_AA0.248-1.1573.373-0.06412.95533.83-3.637-0.4092.7621.3170.10536.158
1267AA_U669G670:C736A737_AA0.005-1.2883.252-0.4517.62729.706-3.86-0.0942.84114.5760.86330.651
1270AA_U672G673:C717G734_AA-1.384-2.1333.5451.4227.90322.867-7.5013.7342.58319.189-3.45224.218
1275AA_U677U678:A712G713_AA0.011-0.8953.566-7.2469.76741.183-2.258-0.7823.23513.53410.04142.866
1276AA_U678C679:G711A712_AA0.561-1.4973.283-1.5831.02834.818-2.653-1.1743.2111.7162.64334.867
1284AA_U686A687:G703A704_AA4.6690.7273.86816.443-20.014-9.2031.80612.576-0.95454.68144.924-27.462
1307AA_U772G773:C806A807_AA0.58-1.4422.943-1.23315.40328.043-4.827-1.231.88829.1542.33431.944
1228AA_U820G570:C866A873_AA-3.591-2.9260.5996.04-172.483-5.5910.433-1.836-2.76689.7643.143-172.598
1319AA_U850G851:U835G836_AA-0.046-2.4932.728-0.47417.62612.564-9.7860.039-0.43254.7761.47221.622
1335AA_U891A892:G906A907_AA4.903-0.8783.487-0.5446.999-9.873-6.45822.4173.571-35.375-2.749-12.11
112AA_U920U921:A1396G15_AA0.734-1.2732.8419.2129.71522.755-4.9680.4552.24922.314-21.15926.357
113AA_U921G922:C1395A1396_AA0.898-1.6493.275-2.60721.17829.667-5.121-1.7421.68336.0764.4436.403
1350AA_U960A1225:U955U956_AA4.5540.4570.491-74.762159.913-46.459-0.8491.9881.585-80.909-37.827-176.808
1362AA_U961C962:G973A1201_AA1.206-3.6613.9790.762-6.661-25.9849.742.8112.9314.5091.66-26.821
1384AA_U991A1046:U1211A1213_AA-1.3825.4863.71259.703-119.97728.272.7280.629-4.352-75.278-37.46135.479
1401AA_U997G998:C1043A1044_AA0.401-1.9893.3799.40511.53426.92-5.8850.9762.35922.705-18.51530.693
1404AA_U1000G1002:U1040A1041_AA-0.862-2.7374.6713.35330.42142.316-5.571.2552.27436.941-4.07251.809
1390AA_U1052A1055:C1200G1206_AA-1.786-1.1233.177-0.9360.15582.613-0.8551.3313.1910.1170.70982.618
1392AA_U1056G1057:C1203A1204_AA-0.693-2.014.233.4015.36129.51-5.2022.1813.71410.373-6.58130.17
1398AA_U1062C1063:G1193U1194_AA-0.373-1.0163.3283.0074.56925.105-3.5521.6733.03310.355-6.81625.685
1418AA_U1070C1071:G1104A1105_AA-0.354-1.7713.514-1.567-2.66533.856-2.5610.333.651-4.5652.68433.992
1421AA_U1073G1074:U1083A1102_AA1.852-1.3693.057-4.75110.5237.733-3.087-3.2242.36515.827.14439.397
1425AA_U1086G1087:C1098G1099_AA0.738-1.9223.995-8.6845.81844.011-3.109-1.8663.5277.63611.39845.175
1437AA_U1121U1122:A1151A1152_AA1.023-1.0273.3213.7428.60833.371-3.043-1.1463.06314.634-6.36134.63
1438AA_U1122A1123:U1150A1151_AA0.753-0.683.0215.25537.57224.99-3.783-0.5751.23257.255-8.00845.175
1357AA_U1232G1233:C948A949_AA1.008-2.0093.2034.9998.74529.93-5.193-0.9982.65516.361-9.35231.543
1360AA_U1235A1236:G945A946_AA0.073-2.573.19514.472-0.21732.093-4.2262.0182.972-0.37-24.6735.127
1460AA_U1247A1248:A1289G1290_AA-5.305-3.0023.58112.94716.91850.687-4.066.381.29718.837-14.41554.708
1373AA_U1330G1331:A1306U1307_AA0.3390.3383.1647.9379.76550.765-0.2550.1343.1911.194-9.09852.201
1344AA_U1341C1342:G941G942_AA-1.363-2.2993.7610.5420.19421.928-6.1283.8233.7060.511-1.42521.935
1349AA_U1345A1346:A1375U1376_AA-2.3884.152-2.936-1.229-11.911-36.68-7.352-3.511-1.63518.336-1.892-38.521
1470AA_U1348A1349:G1373A1374_AA5.691-1.0733.8090.542-0.096-7.8138.17543.493.3930.7013.97-7.832
1473AA_U1351C1352:G1370G1371_AA0.24-2.1543.4316.26310.65128.617-5.9390.6852.48620.389-11.98931.12
1493AA_U1414G1415:U1485G1486_AA-0.117-2.2733.952-6.58810.76717.629-10.455-2.3852.13830.55518.69621.653
1504AA_U1425C1426:G1474G1475_AA-0.46-1.443.2290.1947.83332.693-3.6930.8252.81513.671-0.33833.594
1506AA_U1427A1428:U1472A1473_AA-0.306-1.3683.213-0.65118.51134.206-4.070.3912.21828.9881.01938.767
1514AA_U1436C1437:G1464C1465_AA2.056-1.4733.371-1.4488.59536.653-3.366-3.3692.88413.4352.26437.64
1481AA_U1495C1496:G1405U1406_AA0.923-1.5343.3840.2339.11125.007-5.623-1.9492.67620.203-0.51626.592
1526AA_U1510G1511:C1524G1525_AA-0.983-0.9522.996-4.01219.71525.51-4.6521.1631.92238.0027.73332.385
1528AA_U1512A1513:U1522G1523_AA0.043-1.6632.9676.02714.79626.41-5.3990.8421.77629.231-11.90730.793
1216aa_A2A2M3:70U34U35_bb0.026-1.4683.006-7.59513.58227.156-4.843-1.2311.9926.35814.73931.226

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.