A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Nov-2017 number of released structures: 9218
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NDB ID: 5WNX  PDB ID: 5WNX 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14T_DA4:DT2_D0.04-0.0490.35911.509-15.382-5.183
110T_DA11:DT6_P-0.168-0.2180.260.224-10.135-0.655
113T_DA14:DT3_P0.5920.0530.338-0.296-8.7098.056
11T_DC1:DG5_D0.75-0.2791.904-25.5361.327-8.186
12T_DC2:DG4_D0.879-0.009-0.09911.298-6.8075.83
15T_DC5:DG1_D0.243-0.435-0.1776.7080.9822.313
17T_DC8:DG9_P0.459-0.04-0.51618.9-6.3092.425
19T_DC10:DG7_P0.083-0.0660.2453.985-5.4214.315
112T_DC13:DG4_P0.623-0.488-0.1743.463-9.389-4.052
115T_DC16:DG1_P1.085-0.1840.2777.613-10.1944.938
13T_DG3:DC3_D-0.533-0.0680.065-6.371-19.266-4.424
16T_DG7:DC10_P-0.476-0.2370.27413.2990.981.777
18T_DG9:DC8_P-0.556-0.3230.1978.444-1.7792.379
114T_DG15:DC2_P0.415-0.2570.396.981-10.046-2.123
111T_DT12:DA5_P-0.286-0.0810.270.468-10.2113.914

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.