A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5WNX  PDB ID: 5WNX 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14TT_DA4DC5:DG1DT2_DD1.322-0.413.5324.1023.81431.246-1.519-1.5913.5987.011-7.53931.731
19TT_DA11DT12:DA5DT6_PP0.14-0.723.2140.549-0.10731.523-1.305-0.1573.218-0.198-1.0131.527
112TT_DA14DG15:DC2DT3_PP-0.215-0.3913.084-2.1761.91331.987-1.030.0223.0633.4623.93832.114
11TT_DC1DC2:DG4DG5_DD0.3881.4542.7215.606-11.06735.1913.150.8692.166-16.856-23.76939.91
12TT_DC2DG3:DC3DG4_DD-0.6742.5373.806-0.926-4.19638.9184.3540.883.538-6.2751.38439.145
16TT_DC8DG9:DC8DG9_PP-1.314-0.4273.494-8.0088.85732.624-2.2120.8523.48215.14813.69634.685
18TT_DC10DA11:DT6DG7_PP-0.536-0.6053.22-3.2874.60635.16-1.6470.4073.1547.5645.39835.598
111TT_DC13DA14:DT3DG4_PP0.0820.583.368-2.2695.75237.2410.122-0.4323.4078.9323.52337.733
13TT_DG3DA4:DT2DC3_DD-0.3260.2172.724-1.7354.09437.078-0.1140.3182.7446.4092.71637.334
15TT_DG7DC8:DG9DC10_PP0.635-0.5163.36.3914.9435.221-1.541-0.1063.2628.033-10.39436.107
17TT_DG9DC10:DG7DC8_PP-0.433-0.6643.523-0.5283.79733.759-1.7850.653.4366.5110.90533.97
113TT_DG15DC16:DG1DC2_PP0.63-0.4343.1231.9684.84835.587-1.361-0.7543.0697.88-3.19935.957
110TT_DT12DC13:DG4DA5_PP-0.2420.0043.1312.5725.31638.379-0.6130.6643.0828.028-3.88538.814

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.