A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5WO0  PDB ID: 5WO0 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14T_DA4:DT2_D0.127-0.060.2976.809-5.671-0.572
110T_DA11:DT6_P-0.029-0.2030.116-0.931-12.2954.0
113T_DA14:DT3_P-0.098-0.2520.002-0.265-13.235-2.607
11T_DC1:DG5_D0.205-0.312-0.083-7.64-11.465-3.984
12T_DC2:DG4_D0.149-0.2260.0151.126-4.5980.016
15T_DC5:DG1_D0.234-0.077-0.33715.0051.101-0.572
17T_DC8:DG9_P0.3-0.29-0.30116.366-7.1351.065
19T_DC10:DG7_P0.165-0.1840.0376.682-7.041-2.219
112T_DC13:DG4_P0.579-0.311-0.2083.876-12.91.436
115T_DC16:DG1_P0.432-0.1910.08110.939-12.2641.249
13T_DG3:DC3_D-0.215-0.2370.112-2.543-12.358-0.229
16T_DG7:DC10_P-0.181-0.0970.1947.383-2.2022.098
18T_DG9:DC8_P-0.34-0.227-0.1030.993-0.189-0.552
114T_DG15:DC2_P-0.218-0.2370.2343.601-9.631-0.525
111T_DT12:DA5_P0.066-0.1090.0371.188-12.4992.417

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.