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NDB ID: 5AWH  PDB ID: 5AWH 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
5AWH|1|C|A|105AWH|1|C|A|100BPh
5AWH|1|C|A|105AWH|1|C|C|11s35
5AWH|1|C|A|105AWH|1|C|U|9s53
5AWH|1|C|A|135AWH|1|C|A|13n0BP
5AWH|1|C|A|135AWH|1|C|C|14s35
5AWH|1|C|A|135AWH|1|C|U|12s53
5AWH|1|C|A|35AWH|1|C|C|4s35
5AWH|1|C|A|35AWH|1|C|U|2s53
5AWH|1|C|A|55AWH|1|C|A|50BPh
5AWH|1|C|A|55AWH|1|C|A|6s35
5AWH|1|C|A|55AWH|1|C|C|4s53
5AWH|1|C|A|65AWH|1|C|A|5s53
5AWH|1|C|A|65AWH|1|C|A|60BPh
5AWH|1|C|A|65AWH|1|C|C|7s35
5AWH|1|C|C|115AWH|1|C|A|10s53
5AWH|1|C|C|115AWH|1|C|C|110BPh
5AWH|1|C|C|115AWH|1|C|U|12ns35
5AWH|1|C|C|145AWH|1|C|A|13s53
5AWH|1|C|C|145AWH|1|C|C|140BPh
5AWH|1|C|C|145AWH|1|C|C|15s35
5AWH|1|C|C|155AWH|1|C|C|14s53
5AWH|1|C|C|155AWH|1|C|C|150BPh
5AWH|1|C|C|155AWH|1|C|U|16s35
5AWH|1|C|C|175AWH|1|C|C|170BPh
5AWH|1|C|C|175AWH|1|C|G|18s35
5AWH|1|C|C|175AWH|1|C|U|16s53
5AWH|1|C|C|45AWH|1|C|A|3s53
5AWH|1|C|C|45AWH|1|C|A|5s35
5AWH|1|C|C|45AWH|1|C|C|40BPh
5AWH|1|C|C|75AWH|1|C|A|6s53
5AWH|1|C|C|75AWH|1|C|C|70BPh
5AWH|1|C|C|75AWH|1|C|C|8s35
5AWH|1|C|C|85AWH|1|C|C|7s53
5AWH|1|C|C|85AWH|1|C|C|80BPh
5AWH|1|C|C|85AWH|1|C|U|9s35
5AWH|1|C|G|185AWH|1|C|C|17s53
5AWH|1|C|G|185AWH|1|C|G|180BPh
5AWH|1|C|U|125AWH|1|C|A|13s35
5AWH|1|C|U|125AWH|1|C|C|11ns53
5AWH|1|C|U|125AWH|1|C|U|12n0BP
5AWH|1|C|U|165AWH|1|C|C|15s53
5AWH|1|C|U|165AWH|1|C|C|17s35
5AWH|1|C|U|165AWH|1|C|U|160BPh
5AWH|1|C|U|25AWH|1|C|A|3s35
5AWH|1|C|U|25AWH|1|C|U|20BPh
5AWH|1|C|U|95AWH|1|C|A|10s35
5AWH|1|C|U|95AWH|1|C|C|8s53
5AWH|1|C|U|95AWH|1|C|U|90BPh
5AWH|1|E|A|105AWH|1|E|A|100BPh
5AWH|1|E|A|105AWH|1|E|C|11s35
5AWH|1|E|A|105AWH|1|E|U|9s53
5AWH|1|E|A|135AWH|1|E|A|13n0BP
5AWH|1|E|A|135AWH|1|E|C|14s35
5AWH|1|E|A|135AWH|1|E|U|12s53
5AWH|1|E|A|35AWH|1|E|C|4s35
5AWH|1|E|A|35AWH|1|E|U|2s53
5AWH|1|E|A|55AWH|1|E|A|50BPh
5AWH|1|E|A|55AWH|1|E|A|6s35
5AWH|1|E|A|55AWH|1|E|C|4s53
5AWH|1|E|A|65AWH|1|E|A|5s53
5AWH|1|E|A|65AWH|1|E|A|60BPh
5AWH|1|E|A|65AWH|1|E|C|7s35
5AWH|1|E|C|115AWH|1|E|A|10s53
5AWH|1|E|C|115AWH|1|E|C|110BPh
5AWH|1|E|C|115AWH|1|E|U|12ns35
5AWH|1|E|C|145AWH|1|E|A|13s53
5AWH|1|E|C|145AWH|1|E|C|140BPh
5AWH|1|E|C|145AWH|1|E|C|15s35
5AWH|1|E|C|155AWH|1|E|C|14s53
5AWH|1|E|C|155AWH|1|E|C|150BPh
5AWH|1|E|C|155AWH|1|E|U|16s35
5AWH|1|E|C|175AWH|1|E|C|170BPh
5AWH|1|E|C|175AWH|1|E|G|18s35
5AWH|1|E|C|175AWH|1|E|U|16s53
5AWH|1|E|C|45AWH|1|E|A|3s53
5AWH|1|E|C|45AWH|1|E|A|5s35
5AWH|1|E|C|45AWH|1|E|C|40BPh
5AWH|1|E|C|75AWH|1|E|A|6s53
5AWH|1|E|C|75AWH|1|E|C|70BPh
5AWH|1|E|C|75AWH|1|E|C|8s35
5AWH|1|E|C|85AWH|1|E|C|7s53
5AWH|1|E|C|85AWH|1|E|C|80BPh
5AWH|1|E|C|85AWH|1|E|U|9s35
5AWH|1|E|G|185AWH|1|E|C|17s53
5AWH|1|E|G|185AWH|1|E|G|180BPh
5AWH|1|E|U|125AWH|1|E|A|13s35
5AWH|1|E|U|125AWH|1|E|C|11ns53
5AWH|1|E|U|125AWH|1|E|U|12n0BP
5AWH|1|E|U|165AWH|1|E|C|15s53
5AWH|1|E|U|165AWH|1|E|C|17s35
5AWH|1|E|U|165AWH|1|E|U|160BPh
5AWH|1|E|U|25AWH|1|E|A|3s35
5AWH|1|E|U|25AWH|1|E|U|20BPh
5AWH|1|E|U|95AWH|1|E|A|10s35
5AWH|1|E|U|95AWH|1|E|C|8s53
5AWH|1|E|U|95AWH|1|E|U|90BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (28)Relative Frequency
0BPh281.000
Base-StackingCount (10)Relative Frequency
s53101.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)