A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 12-Aug-2020 number of released structures: 10887
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NDB ID: 5MPL  PDB ID: 5MPL 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
5MPL|1|B|A|35MPL|1|B|A|3n0BP
5MPL|1|B|A|35MPL|1|B|G|4ncSW
5MPL|1|B|C|25MPL|1|B|C|20BPh
5MPL|1|B|G|45MPL|1|B|A|3ncWS
5MPL|1|B|U|15MPL|1|B|U|10BPh
5MPL|1|B|U|55MPL|1|B|U|50BPh
5MPL|1|B|U|65MPL|1|B|U|60BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (4)Relative Frequency
0BPh41.000
Base-StackingCount (0)Relative Frequency

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)