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NDB ID: 5W51  PDB ID: 5W51 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
5W51|1|R|A|15W51|1|R|A|10BPh
5W51|1|R|A|15W51|1|R|U|2s35
5W51|1|R|A|55W51|1|R|A|50BPh
5W51|1|R|A|55W51|1|R|G|4s53
5W51|1|R|A|55W51|1|R|G|6s35
5W51|1|R|A|75W51|1|R|A|70BPh
5W51|1|R|A|75W51|1|R|G|6s53
5W51|1|R|A|75W51|1|R|G|8s35
5W51|1|R|G|35W51|1|R|G|30BPh
5W51|1|R|G|35W51|1|R|G|4s35
5W51|1|R|G|35W51|1|R|U|2s53
5W51|1|R|G|45W51|1|R|A|5s35
5W51|1|R|G|45W51|1|R|G|3s53
5W51|1|R|G|45W51|1|R|G|40BPh
5W51|1|R|G|65W51|1|R|A|5s53
5W51|1|R|G|65W51|1|R|A|7s35
5W51|1|R|G|65W51|1|R|G|60BPh
5W51|1|R|G|85W51|1|R|A|7s53
5W51|1|R|G|85W51|1|R|G|80BPh
5W51|1|R|G|85W51|1|R|G|9s35
5W51|1|R|G|95W51|1|R|G|8s53
5W51|1|R|G|95W51|1|R|G|90BPh
5W51|1|R|U|25W51|1|R|A|1s53
5W51|1|R|U|25W51|1|R|G|3s35
5W51|1|R|U|25W51|1|R|U|20BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (9)Relative Frequency
0BPh91.000
Base-StackingCount (3)Relative Frequency
s5331.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)