A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Oct-2020 number of released structures: 11024
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NDB ID: 5YTV  PDB ID: 5YTV 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
5YTV|1|B|A|35YTV|1|B|A|3n2BP
5YTV|1|B|A|35YTV|1|B|C|2ncSS
5YTV|1|B|A|35YTV|1|B|U|4
5YTV|1|B|C|25YTV|1|B|A|3ncSS
5YTV|1|B|C|55YTV|1|B|C|50BPh
5YTV|1|B|U|45YTV|1|B|A|3
5YTV|1|B|U|45YTV|1|B|U|40BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (2)Relative Frequency
0BPh21.000
Base-StackingCount (0)Relative Frequency

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)