A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 6A57  PDB ID: 6A57 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14B_DC5:DG33_C0.288-0.1160.212-4.547-4.6233.453
16B_DC7:DG31_C0.412-0.2290.561-8.338-12.057-1.802
115B_DC16:DG22_C0.554-0.350.02811.376-17.623-1.649
18B_DG9:DC29_C-0.065-0.1940.1941.79-13.806-3.693
113B_DG14:DC24_C-0.499-0.0450.149-3.162-3.765.642
11B_DT2:DA36_C0.081-0.1360.122-9.147-15.8164.348
12B_DT3:DA35_C0.12-0.157-0.031-2.836-12.9372.733
13B_DT4:DA34_C0.015-0.094-0.091-0.209-12.799-2.48
15B_DT6:DA32_C0.004-0.1570.037-4.015-15.76-0.446
17B_DT8:DA30_C-0.052-0.0860.224-4.153-8.647-2.092
19B_DT10:DA28_C-0.129-0.1060.2240.157-11.521-3.155
110B_DT11:DA27_C-0.248-0.240.0750.305-16.514-2.629
111B_DT12:DA26_C-0.33-0.160.323-7.989-15.027-0.541
112B_DT13:DA25_C0.0920.0250.05-10.0-12.7243.213
114B_DT15:DA23_C-0.184-0.2660.245.237-14.346-2.69

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.