A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 6AK8  PDB ID: 6AK8 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16T_DA7:DT3_P0.118-0.1130.3849.693-15.7750.315
11T_DC1:DG4_D0.131-0.1110.37-10.02-10.257-2.568
14T_DC4:DG1_D0.286-0.092-0.29112.8920.927-1.085
17T_DC8:DG2_P0.324-0.17-0.029.798-12.8860.494
12T_DG2:DC3_D-0.0530.0610.134-0.789-11.1270.508
13T_DG3:DC2_D-0.233-0.1930.2642.394-9.494-2.199
18T_DG9:DC1_P-0.175-0.1270.085-3.032-9.818-1.149
15T_DT6:DA4_P-0.011-0.131-0.0081.3823.1051.122

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.