A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 6AK9  PDB ID: 6AK9 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16T_DA7:DT3_P0.089-0.070.3718.94-15.0140.312
11T_DC1:DG4_D0.124-0.1050.419-11.038-11.006-2.014
14T_DC4:DG1_D0.323-0.109-0.26213.1672.655-1.826
17T_DC8:DG2_P0.377-0.128-0.05511.353-13.7040.679
12T_DG2:DC3_D-0.169-0.1390.202-0.286-13.548-1.227
13T_DG3:DC2_D-0.221-0.1720.2342.186-9.423-2.762
18T_DG9:DC1_P-0.142-0.0850.011-3.339-10.039-1.24
15T_DT6:DA4_P0.051-0.135-0.1070.6045.6432.09

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.