A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: 6AKH  PDB ID: 6AKH 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
15TT_DA7DC8:DG2DT3_PP-0.636-1.2513.3331.4662.39236.482-2.3221.2163.223.814-2.33836.586
11TT_DC1DG2:DC3DG4_DD-0.5280.5763.194.3864.55931.5880.2441.7173.1418.272-7.95732.199
16TT_DC8DG9:DC1DG2_PP-0.785-1.33.487-5.3737.08835.471-3.0970.4753.25711.4148.65236.534
12TT_DG2DG3:DC2DC3_DD0.7890.1763.322-3.1386.29734.695-0.648-1.7663.22210.4275.19635.38
13TT_DG3DC4:DG1DC2_DD0.4680.1113.0924.7612.02226.677-0.2510.1523.1264.33-10.19727.165
14TT_DT6DA7:DT3DA4_PP0.342-1.1043.113-4.7424.6730.413-2.879-1.4722.8318.7718.90631.116

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.