A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6B0Q  PDB ID: 6B0Q 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
18EE_DA9DG10:DC5DT6_FF-1.198-0.5833.296-2.6348.13932.402-2.3561.6453.14714.2774.6233.483
12EE_DC3DG4:DC11DG12_FF-0.9-0.4773.446-6.9719.25731.073-2.4990.3273.29416.57512.48133.113
11EE_DG2DC3:DG12DC13_FF0.51-0.0822.7532.3045.2831.847-0.935-0.5722.7349.525-4.15632.35
13EE_DG4DT5:DA10DC11_FF0.837-0.5763.2792.3745.77332.581-1.976-1.073.18510.173-4.18433.157
15EE_DG6DG7:DC8DC9_FF-0.751-0.8723.3034.7167.65534.906-2.4641.8632.9312.507-7.70436.011
16EE_DG7DG8:DC7DC8_FF0.135-0.7513.275-3.5657.87434.026-2.398-0.7453.00313.1945.97335.076
17EE_DG8DA9:DT6DC7_FF0.201-0.3263.4070.434-2.32732.576-0.158-0.2783.424-4.142-0.77332.66
19EE_DG10DT11:DA4DC5_FF0.708-0.9313.215-1.5251.15730.688-1.977-1.6263.1412.1842.87830.746
111EE_DG12DT13:DA2DC3_FF-0.992-0.6743.331-1.3552.90732.453-1.7141.5283.2975.1862.41732.607
14EE_DT5DG6:DC9DA10_FF-1.064-0.4443.595-6.153-0.65934.138-0.6310.7193.732-1.11210.37534.678
110EE_DT11DG12:DC3DA4_FF-0.268-0.653.362-3.0215.96129.958-2.418-0.0963.18811.3545.75530.678
112EE_DT13DT14:DA1DA2_FF0.519-0.3793.1422.148-2.38835.82-0.283-0.5433.185-3.874-3.48335.959
120BB_DA9DG10:DC6DT7_CC-1.521-0.3823.328-2.9689.69133.461-2.1372.0763.21616.3725.01334.92
114BB_DC3DG4:DC12DG13_CC-0.963-0.2513.489-6.3559.56533.243-1.970.5633.41116.13210.71735.118
113BB_DG2DC3:DG13DC14_CC0.183-0.0932.832.3184.11730.86-0.8510.0412.87.68-4.32431.211
115BB_DG4DT5:DA11DC12_CC1.161-0.5713.4621.1914.33434.757-1.634-1.7393.4057.217-1.98335.038
117BB_DG6DG7:DC9DC10_CC-0.797-0.7653.0721.4395.85434.657-2.0661.5162.8749.736-2.39435.162
118BB_DG7DG8:DC8DC9_CC0.076-0.8593.38-2.6358.72734.669-2.654-0.5033.06714.344.3335.812
119BB_DG8DA9:DT7DC8_CC0.62-0.6023.3232.216-2.94129.849-0.539-0.7263.401-5.682-4.28130.07
121BB_DG10DT11:DA5DC6_CC0.667-0.8223.158-2.603-0.76231.108-1.389-1.7143.112-1.4174.84231.223
123BB_DG12DT13:DA3DC4_CC-0.641-0.8373.325-2.1413.24731.25-2.1550.7773.2595.9993.95631.485
116BB_DT5DG6:DC10DA11_CC-0.981-0.6193.468-4.102-1.09930.661-0.930.983.585-2.0667.71130.947
122BB_DT11DG12:DC4DA5_CC-0.515-0.7023.338-2.1153.52731.172-1.9660.5493.2686.5283.91431.435
124BB_DT13DT14:DA2DA3_CC0.227-0.1752.993.546-0.97836.939-0.1550.0783.002-1.538-5.5837.115

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.