A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 8-Jul-2020 number of released structures: 10846
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NDB ID: 6B1S  PDB ID: 6B1S 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14E_DA4:DT13_F-0.1570.118-0.109-6.46-12.5746.047
16E_DA6:DT11_F0.006-0.105-0.447-5.745-6.4735.848
18E_DA12:DT5_F0.318-0.270.037-1.515-13.6340.981
110E_DA14:DT3_F-0.12-0.2630.1659.585-9.4755.145
111E_DA15:DT2_F0.184-0.1520.17414.053-7.2143.038
11E_DC1:DG16_F0.176-0.0630.632-29.065-5.952.08
112E_DG16:DC1_F-0.1770.0180.5633.477-5.213.349
12E_DT2:DA15_F-0.158-0.0760.441-15.79-6.6665.71
13E_DT3:DA14_F0.004-0.171-0.048-5.634-10.1826.236
15E_DT5:DA12_F0.572-0.2360.0960.464-9.5623.548
17E_DT11:DA6_F-0.641-0.195-0.034-6.317-9.4484.141
19E_DT13:DA4_F0.245-0.2820.1185.933-10.503-0.925

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.