A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 8-Jul-2020 number of released structures: 10846
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NDB ID: 6B1S  PDB ID: 6B1S 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14EE_DA4DT5:DA12DT13_FF-0.118-0.4243.173-0.9290.13130.13-0.8420.0423.1730.2521.78730.144
17EE_DA12DT13:DA4DT5_FF0.184-0.6633.131-1.0381.99429.023-1.734-0.5823.0713.972.06629.108
19EE_DA14DA15:DT2DT3_FF0.173-0.5253.203-0.030.87833.994-1.034-0.33.1891.5020.05134.005
110EE_DA15DG16:DC1DT2_FF0.056-0.2442.893-4.06111.68129.303-2.316-0.7522.5821.9017.61431.753
11EE_DC1DT2:DA15DG16_FF0.327-0.323.11.828.92832.766-1.889-0.2872.92815.457-3.15133.975
12EE_DT2DT3:DA14DA15_FF-0.318-0.532.9224.4823.34130.483-1.5581.3542.7766.289-8.43530.979
13EE_DT3DA4:DT13DA14_FF-0.8581.3833.364-4.9120.5340.5191.9220.6653.4570.7617.0640.806
15EE_DT5DA6:DT11DA12_FF1.420.7453.41511.7091.140.4530.912-0.6343.6871.552-16.51542.058
16EE_DT11DA12:DT5DA6_FF-0.7080.3833.157-3.3055.18344.1490.0380.6363.2226.8564.37144.554
18EE_DT13DA14:DT3DA4_FF0.258-0.1313.1911.4917.26433.933-1.303-0.2113.10612.265-2.51834.711

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.