A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 17-Jan-2018 number of released structures: 9301
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NDB ID: 6BSG  PDB ID: 6BSG 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11D_DA4:U26_R-0.077-0.3150.0582.317-9.5628.294
16D_DA9:U21_R-0.135-0.201-0.0146.63-10.78-4.419
19D_DA12:U18_R0.199-0.1080.022-3.065-6.362-5.202
113D_DA16:U14_R-0.131-0.1260.224-2.794-14.081.019
14D_DC7:G23_R0.475-0.086-0.2071.408-14.691.054
15D_DC8:G22_R0.057-0.229-0.15813.107-5.2444.059
17D_DC10:G20_R0.284-0.203-0.0983.083-15.8840.666
120D_DC23:G7_R1.458-0.337-0.141-1.056-12.713-0.688
121D_DC24:G6_R0.361-0.236-1.542.97512.558-1.78
13D_DG6:C24_R0.093-0.1840.0634.016-8.7860.924
110D_DG13:C17_R-0.1330.0610.05-1.439-7.0325.79
116D_DG19:C11_R-0.246-0.1720.028-4.892-13.1716.798
118D_DG21:C9_R-0.44-0.443-0.031-1.442-10.733.063
119D_DG22:C8_R-0.345-0.385-0.0523.08-10.578.109
12D_DT5:A25_R0.167-0.3380.272.114-15.39912.715
18D_DT11:A19_R0.174-0.190.127-2.859-14.5524.844
111D_DT14:A16_R-0.13-0.3250.222-0.435-13.3426.616
112D_DT15:A15_R-0.303-0.113-0.1539.278-9.528-2.353
114D_DT17:A13_R-0.04-0.1960.0642.753-20.7020.251
115D_DT18:A12_R0.056-0.207-0.1985.315-19.4916.799
117D_DT20:A10_R-0.38-0.511-0.003-3.886-13.501-4.481

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.