A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Jul-2018 number of released structures: 9584
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NDB ID: 6BSH  PDB ID: 6BSH 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12DD_DA3DT4:A25U26_RR0.596-0.642.9811.0114.46924.382-2.704-1.1142.84110.463-2.36824.802
17DD_DA8DC9:G20U21_RR0.183-1.3653.4331.0686.80136.016-3.116-0.1423.13610.876-1.70936.647
110DD_DA11DG12:C17U18_RR-0.54-3.243.2022.5232.74-1.664-1.50735.7143.816-48.49944.657-4.079
114DD_DA15DT16:A13U14_RR-0.538-1.3273.139-0.9321.79632.06-2.7040.8133.0763.2471.68632.122
15DD_DC6DC7:G22G23_RR0.1980.1923.1872.6917.16622.798-3.5220.2122.68237.253-5.83928.595
16DD_DC7DA8:U21G22_RR-1.246-0.7793.48-13.3228.87737.037-2.2460.1393.44613.24219.87340.237
18DD_DC9DT10:A19G20_RR0.264-1.593.3372.55510.34833.205-4.158-0.0712.74617.554-4.33434.828
121DD_DC22DC23:G6G7_RR-0.261-1.5783.1798.052-0.52922.632-3.6283.1362.947-1.295-19.73124.01
14DD_DG5DC6:G23C24_RR-0.643-1.4493.399-2.3971.70531.913-2.9430.7193.3573.0934.34732.044
111DD_DG12DT13:A16C17_RR-0.294-1.6483.377-1.5465.96834.939-3.5750.2583.0739.8452.5535.462
117DD_DG18DT19:A10C11_RR-0.812-1.1923.193-2.1517.22833.626-3.0791.0552.92612.3033.66134.438
119DD_DG20DG21:C8C9_RR1.476-1.8743.1642.69914.425.28-6.374-2.4351.97429.911-5.60629.158
120DD_DG21DC22:G7C8_RR-0.189-1.4643.4642.2621.91844.295-2.1240.473.3872.54-2.99644.389
11DD_DT2DA3:U26A27_RR-1.1680.7913.238-2.4136.533-16.219-6.181-5.142.529-21.889-8.086-17.642
13DD_DT4DG5:C24A25_RR-0.758-0.723.318-5.1339.65137.199-2.2760.5113.11614.7447.84138.717
19DD_DT10DA11:U18A19_RR0.187-1.4733.1391.3526.64331.994-3.67-0.1172.7911.885-2.41932.686
112DD_DT13DT14:A15A16_RR-0.946-1.1443.071.2795.11835.561-2.5181.6992.8488.323-2.0835.937
113DD_DT14DA15:U14A15_RR0.207-1.4233.233-4.2089.54830.512-4.135-1.0652.62917.5127.71832.207
115DD_DT16DT17:A12A13_RR0.244-0.7943.209-0.0024.34735.567-1.895-0.3963.0937.0840.00235.823
116DD_DT17DG18:C11A12_RR-0.139-1.3833.487-2.25211.99728.73-4.834-0.1662.70922.9154.30131.165
118DD_DT19DG20:C9A10_RR0.486-1.0713.2240.73913.44929.918-4.038-0.7452.53324.546-1.34832.747

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.