A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Jul-2018 number of released structures: 9584
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NDB ID: 6BSI  PDB ID: 6BSI 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
113D_DA16:U14_R-0.0040.062-0.201-11.87-12.855.379
16D_DC8:G22_R0.6990.249-0.2368.007-16.5825.619
120D_DC23:G7_R1.201-0.4-0.16612.935-22.173-7.293
121D_DC24:G6_R-0.14-0.168-0.42112.029-9.203-6.749
110D_DG13:C17_R0.6410.1060.175-2.88914.4143.615
116D_DG19:C11_R-0.0350.232-0.014-4.561-19.36413.001
118D_DG21:C9_R0.228-0.0690.4439.861-2.6263.112
119D_DG22:C8_R-0.388-0.105-0.001-3.963-14.5133.386
11D_DT3:A27_R-1.446-0.048-0.4612.931-24.08-15.759
12D_DT4:A26_R-1.140.733-0.95318.379-23.438-27.864
13D_DT5:A25_R0.030.168-1.4470.876-37.407-13.333
14D_DT6:A24_R-0.1870.455-0.394-4.227-26.98110.507
15D_DT7:A23_R-0.3940.151-0.163-3.28-8.8767.701
17D_DT9:A21_R1.209-0.1720.801-12.19-17.571-7.518
18D_DT11:A20_R0.4252.1870.917-14.0878.8-92.553
19D_DT12:A18_R3.668-1.5720.553-6.8572.293-56.24
111D_DT14:A16_R-0.174-0.1850.1644.49-7.26211.582
112D_DT15:A15_R-0.0690.104-0.2756.47-14.4590.612
114D_DT17:A13_R-0.543-0.063-0.4876.971-15.7668.544
115D_DT18:A12_R0.444-0.06-0.64715.624-18.5869.277
117D_DT20:A10_R-0.225-0.127-0.5542.645-24.418-0.407

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.