A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Oct-2021 number of released structures: 11721
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NDB ID: 6C1A  PDB ID: 6C1A 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14CC_DA4DA5:DT8DT9_DD0.5540.1493.135-3.716-1.60737.5570.426-1.3123.059-2.4875.75237.767
15CC_DA5DT6:DA7DT8_DD0.12-0.5793.130.517-2.36430.895-0.644-0.1293.166-4.428-0.96930.988
19CC_DA9DG10:DC3DT4_DD0.6470.4343.147-2.318-1.61535.230.941-1.3923.077-2.6623.82235.34
11CC_DC1DG2:DC11DG12_DD-0.1730.083.089-0.441.49437.997-0.0560.2133.0912.2930.67638.028
12CC_DG2DG3:DC10DC11_DD0.1820.8253.079-0.6543.07426.4811.023-0.5573.1476.6811.42126.664
13CC_DG3DA4:DT9DC10_DD-0.91.6493.71.7221.72343.4422.0361.4033.7232.326-2.32543.507
17CC_DG7DT8:DA55CM6_DD-0.132-0.2992.911-1.3793.08824.438-1.536-0.0642.8557.2513.23724.667
110CC_DG10DG11:DC2DC3_DD-0.2190.263.5491.577-2.84438.810.7630.5353.51-4.271-2.36838.941
111CC_DG11DC12:DG1DC2_DD0.897-0.1483.2812.508-3.45635.6750.261-1.0923.334-5.617-4.07635.921
16CC_DT6DG7:5CM6DA7_DD-0.016-0.1993.6520.7311.77944.226-0.4480.0983.6412.362-0.9744.265
18CC_DT8DA9:DT4DA5_DD-1.3711.0663.333-2.697-1.92639.0831.8241.7133.362-2.8724.02339.218
115GG_DA4DA5:DT8DT9_HH0.4330.0643.252-3.788-2.28338.5680.371-1.1093.188-3.4435.71238.811
116GG_DA5DT6:DA7DT8_HH0.131-0.5083.0381.41-2.00330.522-0.5910.0133.067-3.797-2.67430.618
120GG_DA9DG10:DC3DT4_HH0.6160.3373.132-2.006-3.06835.6450.966-1.2743.055-4.9963.26635.827
112GG_DC1DG2:DC11DG12_HH-0.174-0.0343.18-0.8641.31736.9-0.2270.1613.182.081.36536.933
113GG_DG2DG3:DC10DC11_HH0.1790.8133.1620.8763.27828.6230.915-0.1683.2376.602-1.76428.819
114GG_DG3DA4:DT9DC10_HH-0.7891.4883.60.4551.83941.5571.8791.1643.6522.591-0.64141.598
118GG_DG7DT8:DA55CM6_HH-0.21-0.2532.924-1.5851.44225.213-0.9520.0682.9133.2963.62425.303
121GG_DG10DG11:DC2DC3_HH-0.3070.1183.4681.102-1.81738.4090.4180.6113.45-2.759-1.67338.465
122GG_DG11DC12:DG1DC2_HH0.853-0.1933.3083.181-3.89535.4480.261-0.9183.371-6.357-5.19235.792
117GG_DT6DG7:5CM6DA7_HH0.022-0.2743.672-0.0652.29543.406-0.619-0.0363.6543.10.08843.464
119GG_DT8DA9:DT4DA5_HH-1.441.03.377-2.99-0.91738.8121.6161.7813.45-1.3774.4938.933

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.