A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Oct-2021 number of released structures: 11721
Search for released structures

NDB ID: 6C1T  PDB ID: 6C1T 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16B_5CM6:DG7_C0.265-0.074-0.12410.969-3.8240.334
15B_DA5:DT8_C-0.057-0.216-0.067-4.006-2.0162.837
17B_DA7:DT6_C-0.105-0.101-0.0651.886-5.192-2.617
12B_DC2:DG11_C-0.006-0.1380.122-0.897-6.62-3.644
13B_DC3:DG10_C0.273-0.1710.339-7.497-10.67-0.145
18B_DC8:DG5_C0.18-0.0440.0432.516-11.35-0.057
110B_DC10:DG3_C0.248-0.1580.158-7.383-6.0470.416
111B_DC11:DG2_C0.4-0.1990.0351.55-6.021-1.207
11B_DG1:DC12_C-0.387-0.054-0.133-5.516-5.771.201
112B_DG12:DC1_C-0.246-0.20.1043.4371.89-2.243
14B_DT4:DA9_C-0.068-0.0690.156-5.763-15.282-1.036
19B_DT9:DA4_C-0.122-0.103-0.054-1.692-17.773-3.512

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.