A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Oct-2021 number of released structures: 11721
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NDB ID: 6C1T  PDB ID: 6C1T 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
16BB_5CM6DA7:DT6DG7_CC-0.2140.1283.5650.5590.21843.0530.1510.3523.5630.297-0.76243.057
15BB_DA55CM6:DG7DT8_CC-0.091-0.1282.9640.6644.8223.668-1.6920.4082.87811.596-1.59824.156
17BB_DA7DC8:DG5DT6_CC0.267-0.4693.314-0.96-1.57235.199-0.538-0.5853.323-2.5981.58735.245
12BB_DC2DC3:DG10DG11_CC0.4310.0463.4450.390.25440.7770.036-0.5733.4490.364-0.55940.779
13BB_DC3DT4:DA9DG10_CC-0.7150.3723.2741.4261.55932.4040.3931.5283.2552.79-2.55132.471
18BB_DC8DT9:DA4DG5_CC-0.6930.0073.3362.4014.6635.492-0.6661.4743.2587.592-3.91235.865
110BB_DC10DC11:DG2DG3_CC-0.1050.7663.1660.3233.90626.5910.6590.3083.2418.433-0.69726.873
111BB_DC11DG12:DC1DG2_CC0.2340.1413.285-0.6660.45538.3350.158-0.443.2820.6931.01538.343
11BB_DG1DC2:DG11DC12_CC-0.76-0.0923.243-2.387-2.97233.6640.3210.9193.283-5.114.10533.873
14BB_DT4DA5:DT8DA9_CC1.4481.1963.3322.927-1.49340.1471.911-1.7633.38-2.17-4.25540.275
19BB_DT9DC10:DG3DA4_CC1.0481.543.477-0.006-0.30843.1032.128-1.4283.466-0.4190.00843.104

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.