A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
Search for released structures

NDB ID: 6CFK  PDB ID: 6CFK 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
18141A_4OC1942:G1932_1A119
18231A_5MC1964:U1962_1A00
111A_A6:U2906_1A120
131A_A8:U2904_1A120
1121A_A21:U544_1A120
1181A_A28:G537_1A911
1281A_A38:U467_1A120
1331A_A43:U461_1A120
1671A_A48:U118_1A323
1541A_A63:U89_1A00
1781A_A77:U106_1A120
1841A_A83:G100_1A1011
1661A_A116:G50_1A911
1651A_A117:A51_1A72
1431A_A179:U195_1A424
1441A_A180:A193_1A82
1991A_A188:U2443_1A00
11001A_A205:U458_1A424
11201A_A210:U454_1A424
11011A_A211:G221_1A911
11031A_A214:U219_1A120
11181A_A222:A456_1A21
11051A_A240:G236_1A100
11091A_A244:U232_1A424
11101A_A245:A230_1A82
11111A_A246:G229_1A611
11161A_A251:U224_1A120
11251A_A259:U285_1A424
11261A_A260:G284_1A1011
11661A_A302:U386_1A120
11701A_A306:U382_1A424
11761A_A313:G375_1A511
11811A_A318:G368_1A00
11871A_A324:G362_1A00
11861A_A346:U363_1A50
11371A_A388:U296_1A120
12171A_A401:G427_1A1011
12181A_A428:U400_1A424
12191A_A429:A450_1A21
11551A_A439:A2423_1A100
11521A_A442:U2420_1A120
1241A_A480:G472_1A610
12201A_A483:A497_1A82
12221A_A486:G495_1A1011
12251A_A509:A522_1A100
12031A_A526:A503_1A72
12051A_A528:A505_1A21
12041A_A530:A506_1A21
12311A_A532:A508_1A00
12331A_A554:U2063_1A424
12441A_A561:U580_1A120
12531A_A598:U589_1A120
12561A_A601:G586_1A18
12811A_A613:U714_1A120
12931A_A626:G650_1A60
12981A_A632:G644_1A1011
13051A_A662:G676_1A60
13151A_A722:U850_1A424
13161A_A723:A849_1A45
13171A_A724:A847_1A21
13271A_A736:U820_1A120
13371A_A765:G760_1A00
13411A_A769:U756_1A120
13461A_A774:G751_1A911
13521A_A782:A808_1A100
13621A_A793:G795_1A00
13691A_A799:U2621_1A120
13711A_A824:U834_1A120
13791A_A882:U869_1A120
13851A_A888:U982_1A120
13911A_A896:G974_1A1011
14031A_A908:G962_1A1011
14051A_A910:U959_1A120
14091A_A917:U953_1A120
14111A_A919:U951_1A120
14351A_A1018:A867_1A82
14611A_A1056:C1054_1A00
14661A_A1074:A1172_1A82
14671A_A1075:G1171_1A1011
14701A_A1078:G1168_1A18
14821A_A1094:G1156_1A00
14841A_A1096:C1155_1A10
14881A_A1100:U1151_1A120
14971A_A1103:U1127_1A120
14961A_A1132:U1128_1A120
15071A_A1188:U1065_1A221
14651A_A1189:U1058_1A323
15121A_A1194:U1060_1A120
15191A_A1201:U1045_1A424
14371A_A1234:G865_1A1011
14421A_A1239:U860_1A120
14521A_A1249:A1287_1A82
15371A_A1258:G1282_1A1011
15381A_A1259:G1281_1A911
12621A_A1300:G608_1A611
12691A_A1308:U2039_1A120
15481A_A1314:G2034_1A1011
15491A_A1315:U2033_1A120
15571A_A1332:U1328_1A424
15841A_A1347:G1672_1A60
15891A_A1354:A1654_1A21
15771A_A1363:U1381_1A120
15941A_A1388:U1648_1A424
16021A_A1400:G1423_1A1011
16071A_A1405:U1418_1A221
16081A_A1406:G1417_1A911
16131A_A1441:U1436_1A00
16281A_A1458:U1636_1A120
16351A_A1465:U1625_1A424
16421A_A1473:A1618_1A82
16681A_A1500:A1504_1A00
16951A_A1532:U1549_1A120
16871A_A1574:A1589_1A82
16881A_A1575:G1588_1A1011
16571A_A1600:U1484_1A424
17011A_A1601:A1681_1A45
16611A_A1605:A1480_1A21
16641A_A1609:U1477_1A120
17041A_A1702:A2027_1A100
17131A_A1711:C2018_1A226
17141A_A1712:U2017_1A120
17161A_A1716:U2015_1A120
17341A_A1736:A1745_1A82
17351A_A1737:G1744_1A1011
17471A_A1780:U1756_1A120
17521A_A1804:A1999_1A60
17611A_A1814:G2619_1A110
17701A_A1822:G1859_1A1011
17801A_A1833:A1846_1A82
17811A_A1834:G1845_1A511
17531A_A1860:U1740_1A120
18011A_A1885:G1910_1A1011
18061A_A1890:G1905_1A611
17861A_A1912:C1883_1A60
17951A_A1923:U1872_1A120
18131A_A1941:PSU1933_1A00
18001A_A1954:G1990_1A1011
12581A_A2041:G2057_1A18
12591A_A2042:U2056_1A120
12521A_A2052:A590_1A00
12391A_A2055:U585_1A120
18511A_A2079:U2623_1A120
18521A_A2084:2MA2515_1A72
19151A_A2139:A2193_1A10
19171A_A2141:G2190_1A610
19481A_A2148:G2184_1A60
19041A_A2157:G2178_1A911
19201A_A2198:U2144_1A120
19421A_A2221:G2236_1A1011
18541A_A2239:U2114_1A00
18671A_A2253:U2101_1A120
19531A_A2259:U2269_1A120
14011A_A2280:A964_1A82
19571A_A2285:A2278_1A72
19581A_A2286:U2277_1A00
19611A_A2290:U2274_1A120
19711A_A2299:U2356_1A221
19801A_A2310:G2330_1A1011
19881A_A2334:A2347_1A21
19941A_A2373:C2368_1A00
19991A_A2378:G2363_1A1011
110021A_A2381:U2360_1A120
110111A_A2404:C2436_1A425
110121A_A2405:A2434_1A45
18701A_A2447:U2096_1A120
18801A_A2462:C2513_1A425
18811A_A2463:G2083_1A18
18831A_A2465:U2512_1A120
18891A_A2471:U2505_1A120
18991A_A2481:G2493_1A911
110711A_A2543:A2674_1A21
18371A_A2578:U2574_1A424
17601A_A2599:G2620_1A1011
17631A_A2601:PSU2617_1A10
17641A_A2602:U2616_1A120
18441A_A2633:U2069_1A120
110691A_A2669:G2676_1A911
16701A_A2717:U2714_1A60
110411A_A2723:U2708_1A120
110491A_A2734:U2700_1A60
110531A_A2738:U2696_1A120
110871A_A2747:G2783_1A511
110911A_A2751:G2779_1A18
110931A_A2754:G2776_1A1011
111001A_A2761:U2767_1A424
111011A_A2762:A2766_1A45
111021A_A2763:C2765_1A50
110291A_A2778:A2553_1A50
110761A_A2788:A2651_1A100
110781A_A2789:U2649_1A424
110771A_A2791:G2650_1A1011
111091A_A2820:G2900_1A1011
111121A_A2823:U2897_1A120
111191A_A2831:A2836_1A50
111331A_A2861:U2876_1A00
191A_C18:G547_1A119
1101A_C19:G546_1A119
1111A_C20:G545_1A119
1131A_C22:G543_1A119
1211A_C31:G500_1A119
1221A_C32:G499_1A119
1271A_C37:G468_1A119
1291A_C39:G466_1A119
1301A_C40:G465_1A119
1311A_C41:G464_1A119
1501A_C45:G168_1A119
1511A_C46:G167_1A119
1531A_C61:G91_1A119
1551A_C64:G88_1A119
1561A_C65:G87_1A119
1591A_C68:G57_1A119
1761A_C75:G108_1A119
1771A_C76:G107_1A119
1861A_C85:G95_1A119
1871A_C86:G94_1A119
1621A_C113:G54_1A119
1631A_C114:G53_1A119
1881A_C126:G121_1A119
1891A_C127:G120_1A119
1901A_C128:G119_1A119
1931A_C131:G146_1A119
1941A_C132:G145_1A119
1971A_C135:G142_1A119
1701A_C151:G164_1A119
1721A_C153:G162_1A119
1741A_C155:G160_1A119
1361A_C172:G203_1A119
1371A_C173:G201_1A119
1451A_C181:C192_1A100
11071A_C242:G234_1A119
11221A_C256:G452_1A119
11231A_C257:G451_1A119
11271A_C262:G282_1A119
11281A_C263:G281_1A119
11311A_C266:G278_1A119
11321A_C267:G277_1A119
11351A_C270:G273_1A00
11671A_C303:G385_1A119
11681A_C304:G384_1A119
11721A_C309:G380_1A119
11731A_C310:G379_1A119
11741A_C311:G378_1A119
11751A_C312:G377_1A119
11781A_C315:G373_1A119
11791A_C316:G372_1A119
11831A_C320:G366_1A119
11841A_C321:G365_1A119
11961A_C326:G339_1A119
11941A_C358:G341_1A119
11421A_C394:G291_1A119
11431A_C395:G290_1A119
11441A_C396:G289_1A119
12161A_C402:G426_1A119
12151A_C403:G425_1A119
12141A_C404:G424_1A119
12131A_C405:G423_1A119
12071A_C412:G438_1A119
11541A_C440:G2422_1A119
11531A_C441:G2421_1A119
11511A_C443:G2419_1A119
11501A_C444:G437_1A119
11481A_C446:G435_1A119
11471A_C447:G434_1A119
12231A_C487:G494_1A119
12241A_C488:G493_1A119
12261A_C510:G521_1A119
12271A_C511:G520_1A119
12281A_C512:G519_1A119
12291A_C513:G518_1A119
12061A_C534:G507_1A119
12431A_C560:G581_1A119
12451A_C562:G579_1A119
12481A_C565:G576_1A119
12491A_C566:G575_1A119
12501A_C567:G574_1A119
12511A_C568:G573_1A119
12741A_C610:U857_1A30
12801A_C612:G715_1A119
12821A_C614:G713_1A119
12861A_C618:G709_1A119
12921A_C624:G703_1A119
12951A_C628:G648_1A119
13001A_C634:G642_1A119
13011A_C635:G641_1A119
13081A_C665:G673_1A119
13091A_C666:G672_1A119
13121A_C692:G698_1A119
12751A_C718:G856_1A119
12761A_C719:G855_1A119
12771A_C720:U854_1A00
13181A_C725:G846_1A119
13191A_C726:G845_1A119
13231A_C730:G841_1A119
13251A_C734:A1811_1A50
13291A_C738:G818_1A119
13301A_C739:G817_1A119
13311A_C740:G816_1A119
13351A_C744:G812_1A119
13361A_C745:G810_1A119
13381A_C766:G759_1A119
13391A_C767:G758_1A119
13401A_C768:G757_1A119
13481A_C777:G749_1A119
13491A_C778:G748_1A119
13501A_C779:G747_1A119
13531A_C783:G807_1A119
13541A_C784:G806_1A119
13781A_C881:G870_1A119
13811A_C884:G987_1A119
13821A_C885:G985_1A119
13841A_C887:G983_1A119
13881A_C891:G979_1A119
13901A_C893:G976_1A119
13921A_C897:G973_1A119
13981A_C903:G967_1A119
13991A_C904:G966_1A119
14151A_C923:A947_1A10
14221A_C931:G938_1A10
14231A_C932:A937_1A00
14261A_C1009:A998_1A10
14271A_C1010:G997_1A119
14291A_C1012:G995_1A119
14321A_C1015:G992_1A119
14331A_C1016:G991_1A119
14581A_C1022:G1033_1A119
14751A_C1084:G1163_1A119
14771A_C1086:G1161_1A119
14781A_C1087:G1160_1A119
14801A_C1089:G1158_1A119
14831A_C1095:G2764_1A119
14861A_C1098:G1153_1A119
14871A_C1099:G1152_1A119
14941A_C1138:G1145_1A119
15051A_C1185:G1070_1A119
15091A_C1191:G1063_1A119
15101A_C1192:G1062_1A119
15111A_C1193:G1061_1A119
15141A_C1196:G1057_1A119
15161A_C1198:G1049_1A119
15171A_C1199:G1048_1A119
15211A_C1204:G1043_1A119
15241A_C1207:G1039_1A119
15291A_C1212:G1228_1A119
14441A_C1241:G1296_1A119
14481A_C1245:G1291_1A119
14491A_C1246:G1290_1A119
14501A_C1247:G1289_1A119
14541A_C1252:G1285_1A119
14551A_C1253:G1284_1A119
15411A_C1262:G1278_1A119
15421A_C1263:G1277_1A119
15441A_C1266:G1275_1A119
15451A_C1267:G1274_1A119
15461A_C1268:G1273_1A119
12611A_C1297:A609_1A425
12641A_C1303:G606_1A119
12651A_C1304:G605_1A119
12681A_C1307:G602_1A119
15501A_C1316:G2032_1A119
15581A_C1335:G1327_1A119
15591A_C1336:G1326_1A119
15601A_C1337:G1325_1A119
15621A_C1339:G1323_1A119
15641A_C1341:G1692_1A119
15661A_C1343:G1690_1A119
15671A_C1344:G1689_1A119
15861A_C1350:G1670_1A119
15871A_C1351:G1669_1A119
15881A_C1352:G1668_1A119
15741A_C1360:G1384_1A119
15751A_C1361:G1383_1A119
15781A_C1364:G1380_1A119
15951A_C1391:G1647_1A119
15991A_C1396:G1427_1A119
16001A_C1397:G1426_1A119
16101A_C1408:G1415_1A119
16111A_C1409:G1414_1A119
16141A_C1444:G1435_1A119
16151A_C1445:G1434_1A119
16181A_C1448:G1431_1A119
16191A_C1449:G1390_1A119
16201A_C1450:G1389_1A119
16231A_C1453:G1641_1A119
16241A_C1454:G1640_1A119
16251A_C1455:G1639_1A119
16271A_C1457:G1637_1A119
16331A_C1463:G1628_1A119
16431A_C1474:A1617_1A00
16461A_C1509:G1497_1A119
16471A_C1510:G1495_1A119
16481A_C1511:G1494_1A119
16721A_C1559:G1527_1A119
16741A_C1561:G1525_1A119
16771A_C1564:G1522_1A119
16901A_C1577:G1586_1A119
16911A_C1578:G1585_1A119
16511A_C1594:G1490_1A119
16521A_C1595:G1489_1A119
16531A_C1596:G1488_1A119
16541A_C1597:G1487_1A119
16551A_C1598:G1486_1A119
16591A_C1603:G1482_1A119
16601A_C1604:G1481_1A119
16661A_C1611:G1475_1A119
16671A_C1612:G1615_1A119
17021A_C1657:G1666_1A119
17031A_C1658:G1665_1A119
15731A_C1677:G1682_1A119
15511A_C1695:G2031_1A119
17051A_C1703:G2026_1A119
17061A_C1704:G2025_1A119
17071A_C1705:G2024_1A119
17091A_C1707:G2022_1A119
17111A_C1709:G2020_1A119
17121A_C1710:G2019_1A119
17291A_C1730:G1752_1A119
17301A_C1731:G1751_1A119
17311A_C1732:G1750_1A119
17321A_C1733:G1749_1A119
17361A_C1738:G1743_1A119
17391A_C1772:G1764_1A119
17401A_C1773:G1763_1A119
17411A_C1774:G1762_1A119
17421A_C1775:G1761_1A119
17491A_C1782:G1754_1A119
17501A_C1783:G1787_1A119
17201A_C1796:G2009_1A119
17221A_C1798:G2007_1A119
17261A_C1802:G2002_1A119
13631A_C1805:G776_1A119
17721A_C1824:G1857_1A119
17741A_C1826:G1855_1A119
17761A_C1828:G1853_1A119
17791A_C1831:G1848_1A222
17821A_C1835:G1844_1A119
17841A_C1837:G1842_1A119
17541A_C1861:G1997_1A119
17561A_C1863:G1995_1A119
17881A_C1914:G1881_1A119
17891A_C1915:G1880_1A119
17901A_C1916:G1877_1A119
17911A_C1917:G1876_1A119
17961A_C1924:G1871_1A119
17991A_C1927:G1866_1A119
18181A_C1946:G1928_1A119
18191A_C1947:G1951_1A222
18271A_C1969:G1981_1A119
18221A_C1989:G1955_1A119
12361A_C2047:G2060_1A119
12371A_C2048:G2059_1A119
18841A_C2077:C2511_1A60
19131A_C2133:G2169_1A10
19501A_C2150:G2182_1A119
19511A_C2151:G2181_1A119
19051A_C2158:G2177_1A119
19061A_C2159:G2176_1A119
19071A_C2160:G2175_1A119
19081A_C2161:G2174_1A119
19091A_C2162:G2173_1A119
19111A_C2164:G2171_1A119
19121A_C2165:G2170_1A119
19181A_C2196:G2146_1A119
19191A_C2197:G2145_1A119
19211A_C2199:G2143_1A119
19221A_C2200:G2142_1A119
19231A_C2201:G2132_1A119
19271A_C2205:G2128_1A119
19291A_C2207:G2126_1A119
19321A_C2210:G2123_1A119
19391A_C2217:G2116_1A119
19401A_C2218:G2115_1A119
19431A_C2222:G2235_1A119
19441A_C2223:G2234_1A119
19451A_C2224:G2233_1A119
19471A_C2226:G2231_1A119
18561A_C2241:G2112_1A119
18581A_C2243:G2110_1A119
18631A_C2248:G2105_1A119
18661A_C2252:G2102_1A119
19541A_C2260:G2268_1A119
19551A_C2287:G2267_1A119
19641A_C2293:G2271_1A119
19751A_C2304:G2352_1A119
19761A_C2305:G2351_1A119
19771A_C2306:G2350_1A119
19781A_C2307:G2349_1A119
19791A_C2309:G2333_1A119
19831A_C2313:G2327_1A119
19901A_C2336:G2343_1A119
19701A_C2338:G2401_1A119
110091A_C2371:G2440_1A119
19961A_C2375:G2366_1A119
19971A_C2376:G2365_1A119
110011A_C2380:G2361_1A119
110071A_C2386:G2391_1A119
19911A_C2397:G2342_1A119
19921A_C2398:G2341_1A119
11651A_C2407:G2433_1A119
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134812a_G1255:C1282_2a119
134822a_G1258:C1277_2a119
134882a_G1265:C1270_2a119
133652a_G1323:C1314_2a119
133732a_G1331:A1306_2a911
133762a_G1334:C1303_2a119
133432a_G1343:C940_2a119
134952a_G1353:C1369_2a119
134972a_G1355:C1367_2a119
134982a_G1356:C1366_2a119
135012a_G1457:C1445_2a119
135022a_G1458:C1444_2a119
135052a_G1461:C1440_2a119
135062a_G1462:C1439_2a119
135082a_G1464:C1437_2a119
135112a_G1467:A1434_2a911
135132a_G1469:C1431_2a119
135142a_G1470:C1430_2a119
135152a_G1471:C1429_2a119
135182a_G1474:C1426_2a119
135192a_G1475:U1425_2a128
135202a_G1476:C1424_2a119
135242a_G1480:C1420_2a119
135262a_G1482:A1418_2a1011
135302a_G1486:U1414_2a00
135312a_G1487:A1413_2a18
135322a_G1488:C1412_2a119
135332a_G1489:C1411_2a119
135352a_G1491:C1409_2a119
135362a_G1494:5MC1407_2a119
135392a_G1497:5MC1404_2a119
135432a_G1504:C1399_2a119
135442a_G1505:A1502_2a30
135462a_G1508:C1527_2a119
135492a_G1511:C1524_2a119
131822a_PSU516:A533_2a423
129652a_U12:G22_2a128
129912a_U30:A553_2a120
129972a_U37:A397_2a221
129982a_U49:U365_2a40
130092a_U62:G105_2a128
130412a_U114:A313_2a120
130572a_U125:G236_2a128
130612a_U129:G232_2a128
130642a_U133:U229_2a116
130812a_U189K:G189_2a128
130832a_U190:C187_2a00
130852a_U192:A185_2a120
131082a_U249:G275_2a128
131092a_U252:A274_2a120
131102a_U253:A273_2a120
131132a_U256:A270_2a120
131192a_U294:A303_2a120
131212a_U296:G301_2a128
130352a_U340:A349_2a120
130012a_U358:A53_2a120
130002a_U359:G52_2a128
131552a_U387:G376_2a128
131702a_U404:U498_2a30
131292a_U427:G416_2a128
131352a_U434:A408_2a120
131382a_U437:A495_2a424
132122a_U571:A865_2a120
132232a_U636:A602_2a120
132312a_U646:G593_2a128
132432a_U659:A746_2a120
132522a_U669:A737_2a120
132552a_U672:G734_2a128
132602a_U677:G713_2a10
132612a_U678:A712_2a120
132692a_U686:A704_2a424
132982a_U772:A807_2a120
133102a_U788:A794_2a00
132102a_U820:A873_2a323
132092a_U827:A872_2a221
133142a_U850:G836_2a128
133312a_U891:A907_2a424
129722a_U920:G15_2a128
129732a_U921:A1396_2a120
133472a_U960:U956_2a213
133602a_U961:A1201_2a221
133852a_U991:A1213_2a424
133882a_U997:A1044_2a120
133912a_U1000:A1041_2a120
134012a_U1012:G1017_2a128
134032a_U1025:G1036_2a128
134102a_U1052:G1206_2a128
134122a_U1056:A1204_2a120
134182a_U1062:U1194_2a116
134242a_U1070:A1105_2a120
134272a_U1073:A1102_2a120
134322a_U1086:G1099_2a10
134362a_U1090:U1095_2a116
134452a_U1121:A1152_2a120
134462a_U1122:A1151_2a120
134562a_U1135:G1138_2a60
133542a_U1232:A949_2a120
133572a_U1235:A946_2a120
134752a_U1247:G1290_2a128
133722a_U1330:U1307_2a116
133412a_U1341:G942_2a128
133462a_U1345:U1376_2a213
134902a_U1348:A1374_2a424
134932a_U1351:G1371_2a128
135002a_U1358:A1363A_2a221
135162a_U1472:A1428_2a120
135252a_U1481:G1419_2a128
135292a_U1485:G1415_2a128
135372a_U1495:U1406_2a00
135482a_U1510:G1525_2a128
135502a_U1512:G1523_2a128

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)