A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: 6CHV  PDB ID: 6CHV 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13I_DA3:DT19_J-0.28-0.214-0.23-7.759-3.4362.187
16I_DA6:DT16_J-0.151-0.1440.198-2.889-18.339-7.099
18I_DA8:DT14_J-0.2430.1260.2353.097-12.0320.792
110I_DA10:DT12_J-0.194-0.116-0.575-8.607-8.0216.984
113I_DA13:DT9_J-0.4590.01-0.258-9.631-14.0061.623
117I_DA17:DT5_J0.30.043-0.493-7.508-7.2668.793
118I_DA18:DT4_J-0.324-0.1460.3739.08-1.25-3.422
120I_DA20:DT2_J0.036-0.176-0.16914.111-6.2777.079
17I_DC7:DG15_J0.122-0.1420.789-7.283-14.363-0.665
19I_DC9:DG13_J0.2260.163-0.0324.664-13.034.824
111I_DC11:DG11_J-0.055-0.165-0.1662.176-16.4324.88
112I_DC12:DG10_J0.602-0.1250.006-0.435-9.4144.031
121I_DC21:DG1_J-0.042-0.022-0.26511.168-13.3292.365
11I_DG1:DC21_J-0.038-0.014-0.187-8.028-14.001-0.629
115I_DG15:DC7_J-0.2120.0250.3551.934-13.131-0.671
12I_DT2:DA20_J-0.468-0.193-0.211-10.639-13.0417.123
14I_DT4:DA18_J-0.128-0.148-0.0162.948-13.3043.168
15I_DT5:DA17_J-0.333-0.088-0.49110.726-6.7349.296
114I_DT14:DA8_J-0.255-0.029-0.1512.808-12.734-2.309
116I_DT16:DA6_J-0.215-0.0570.2410.439-16.897-5.526
119I_DT19:DA3_J0.391-0.0840.1294.73-6.9645.2
124E_DA3:DT19_F-0.129-0.137-0.288-7.248-0.40.691
127E_DA6:DT16_F0.198-0.0960.7615.793-11.686-7.268
129E_DA8:DT14_F0.214-0.0040.1081.602-12.2730.129
131E_DA10:DT12_F0.04-0.34-0.673-9.546-12.2780.137
134E_DA13:DT9_F-0.458-0.223-0.301-9.221-11.475-2.581
138E_DA17:DT5_F0.579-0.213-0.209-5.809-7.287.003
139E_DA18:DT4_F-0.071-0.3520.1572.844-4.6012.582
141E_DA20:DT2_F0.101-0.114-0.17413.821-10.41511.371
128E_DC7:DG15_F0.702-0.010.588-4.619-13.6120.459
130E_DC9:DG13_F0.901-0.0720.1432.742-9.874.072
132E_DC11:DG11_F0.701-0.1260.015-6.516-12.9542.231
133E_DC12:DG10_F0.906-0.062-0.08-1.253-6.8077.824
142E_DC21:DG1_F0.2810.012-0.45113.975-9.5063.683
122E_DG1:DC21_F-0.404-0.294-0.214-10.8-12.599-1.106
136E_DG15:DC7_F-0.578-0.1640.2961.542-14.798-0.918
123E_DT2:DA20_F-0.313-0.1780.165-14.485-11.7958.764
125E_DT4:DA18_F0.49-0.2370.1020.147-4.492-2.368
126E_DT5:DA17_F0.047-0.0330.0377.34-3.2317.656
135E_DT14:DA8_F0.292-0.008-0.03-0.871-11.7680.24
137E_DT16:DA6_F-0.063-0.1370.4-1.98-15.445-5.64
140E_DT19:DA3_F0.748-0.167-0.15810.029-2.9393.45
145K_DA3:DT19_L-0.546-0.342-0.42-11.479-1.7440.373
148K_DA6:DT16_L0.0740.1230.5111.924-13.931-6.519
150K_DA8:DT14_L0.4730.060.3036.845-12.5471.771
152K_DA10:DT12_L-0.364-0.254-0.522-5.927-9.365-1.239
155K_DA13:DT9_L-0.3140.1180.229-1.352-15.4522.102
159K_DA17:DT5_L-0.119-0.076-0.155-3.089-4.5977.653
160K_DA18:DT4_L0.314-0.0070.313.122-13.8051.56
162K_DA20:DT2_L0.206-0.2350.1138.174-14.5458.857
149K_DC7:DG15_L0.161-0.220.826-10.126-13.718-0.607
151K_DC9:DG13_L0.3930.0130.1970.177-15.013.513
153K_DC11:DG11_L-0.012-0.0460.08-1.215-11.76.196
154K_DC12:DG10_L0.4820.144-0.2444.13-8.55311.267
163K_DC21:DG1_L0.385-0.49-0.1237.669-14.566-5.984
143K_DG1:DC21_L-0.781-0.176-0.534-15.141-16.278-3.218
157K_DG15:DC7_L-0.415-0.1190.193-1.345-15.637-3.243
144K_DT2:DA20_L-0.182-0.089-0.094-12.367-12.4754.864
146K_DT4:DA18_L-0.023-0.2760.21-5.397-3.461-3.063
147K_DT5:DA17_L-0.616-0.093-0.3837.375-7.5716.825
156K_DT14:DA8_L0.1330.021-0.1141.042-13.936-2.965
158K_DT16:DA6_L-0.195-0.250.2550.345-19.64-3.643
161K_DT19:DA3_L0.225-0.2020.351-0.216-6.62-0.636

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.