A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Jul-2018 number of released structures: 9608
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NDB ID: 6CVP  PDB ID: 6CVP 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13DD_DA4DT5:DA6DT7_EE-0.256-0.5393.0162.2724.23928.933-1.8940.9512.8818.41-4.50829.322
16DD_DA7DT8:DA3DT4_EE-0.045-0.5933.3330.286-5.18933.031-0.1450.1273.384-9.057-0.533.426
15DD_DG6DA7:DT4DC5_EE0.178-0.2283.328-0.2811.88138.281-0.586-0.3073.3122.8660.42938.327
11DD_DT2DT3:DA8DA9_EE-0.184-0.4473.0254.1864.67933.425-1.4460.9252.8948.047-7.19933.993
12DD_DT3DA4:DT7DA8_EE0.239-0.5463.351-2.3517.87133.159-2.183-0.7813.1213.5354.04334.134
14DD_DT5DG6:DC5DA6_EE-0.2280.3733.378-0.6117.31534.839-0.5040.2793.38812.0511.00735.58
17DD_DT8DT9:DA2DA3_EE0.112-0.463.211.368-2.38136.288-0.4090.0083.234-3.816-2.19236.388
18DD_DT9DC10:DG1DA2_EE0.143-0.3183.4870.696-4.02241.3650.008-0.1223.503-5.677-0.98341.557
111GG_DA4DT5:DA6DT7_HH0.571-0.6283.2320.0924.95932.334-1.951-0.9983.1068.84-0.16432.702
114GG_DA7DT8:DA3DT4_HH-0.74-0.7233.176-1.5682.47829.216-1.9431.1353.144.8983.09929.359
113GG_DG6DA7:DT4DC5_HH-0.367-0.13.257-5.0157.05134.193-1.214-0.1413.19511.7598.36535.239
19GG_DT2DT3:DA8DA9_HH-0.195-0.4982.9512.564.4231.062-1.6530.7852.838.183-4.7431.469
110GG_DT3DA4:DT7DA8_HH-0.132-0.4513.402-0.0189.07531.696-2.3770.233.15616.2040.03332.938
112GG_DT5DG6:DC5DA6_HH0.588-0.1853.5396.84211.28735.244-1.8980.0633.37817.885-10.84237.561
115GG_DT8DT9:DA2DA3_HH0.154-0.1173.0973.7025.30631.672-1.10.3443.0369.597-6.69632.31
116GG_DT9DC10:DG1DA2_HH0.599-0.193.4570.693-2.55340.2790.029-0.7863.471-3.703-1.00640.362

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.