A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 19-Sep-2018 number of released structures: 9779
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NDB ID: 6CVQ  PDB ID: 6CVQ 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13D_DA4:DT7_E0.158-0.108-0.157-6.423-11.6121.397
16D_DA7:DT4_E0.099-0.130.0983.785-14.7992.218
19D_DC10:DG1_E0.305-0.149-0.115-3.218-12.5753.228
15D_DG6:DC5_E-0.193-0.175-0.05510.414-7.0542.039
11D_DT2:DA9_E-0.086-0.0880.312-15.351-9.69-0.57
12D_DT3:DA8_E-0.057-0.227-0.181.731-7.429-1.396
14D_DT5:DA6_E0.088-0.058-0.076-0.925-9.2162.694
17D_DT8:DA3_E-0.167-0.070.14-0.409-16.421.737
18D_DT9:DA2_E-0.014-0.102-0.0970.811-15.5752.205
112G_DA4:DT7_H0.144-0.1930.143.305-6.5363.348
115G_DA7:DT4_H0.044-0.1060.055-0.53-13.1483.607
118G_DC10:DG1_H0.235-0.1490.097-10.173-11.52.071
114G_DG6:DC5_H-0.215-0.2750.02210.056-10.3672.642
110G_DT2:DA9_H-0.06-0.1330.347-16.32-11.327-0.777
111G_DT3:DA8_H-0.088-0.134-0.1542.446-6.796-1.59
113G_DT5:DA6_H-0.221-0.152-0.04611.623-9.452-0.018
116G_DT8:DA3_H-0.195-0.1190.152-1.603-15.5052.298
117G_DT9:DA2_H-0.15-0.1870.086-2.772-15.9022.034

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.