A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Jul-2018 number of released structures: 9608
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NDB ID: 6CVQ  PDB ID: 6CVQ 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13DD_DA4DT5:DA6DT7_EE0.008-0.7273.1020.9353.22829.727-2.0340.1653.0076.266-1.81629.912
16DD_DA7DT8:DA3DT4_EE0.167-0.763.324-0.326-3.15534.676-0.777-0.3293.376-5.280.54634.817
15DD_DG6DA7:DT4DC5_EE-0.447-0.0853.316-2.3852.63638.845-0.4510.3773.3243.9533.57739.001
11DD_DT2DT3:DA8DA9_EE-0.099-0.4122.9234.195.42832.184-1.5450.8062.7849.655-7.45332.888
12DD_DT3DA4:DT7DA8_EE0.283-0.7163.4780.88710.06733.037-2.822-0.3353.13817.208-1.51534.507
14DD_DT5DG6:DC5DA6_EE-0.0390.9573.1320.7047.52731.6120.4030.1923.26613.575-1.26932.481
17DD_DT8DT9:DA2DA3_EE-0.185-0.3933.1341.6241.67633.223-0.9520.5813.0992.927-2.83533.303
18DD_DT9DC10:DG1DA2_EE0.461-0.0243.2421.2581.0539.116-0.161-0.5393.2531.568-1.87839.149
111GG_DA4DT5:DA6DT7_HH-0.508-0.4483.0881.6131.11427.764-1.1811.4173.0352.319-3.35627.832
114GG_DA7DT8:DA3DT4_HH-0.104-0.6673.255-0.892-4.0233.173-0.490.0323.312-7.0071.55433.421
113GG_DG6DA7:DT4DC5_HH0.015-0.2193.389-1.2811.98340.147-0.551-0.1723.3732.8861.86440.214
19GG_DT2DT3:DA8DA9_HH-0.486-0.6552.8962.2333.76730.665-1.8581.2852.7567.078-4.19530.968
110GG_DT3DA4:DT7DA8_HH-0.037-0.7873.26-2.7878.04430.955-2.826-0.4182.9614.7255.10232.076
112GG_DT5DG6:DC5DA6_HH0.0310.1933.321.0719.34539.476-0.7890.0773.2813.601-1.55940.538
115GG_DT8DT9:DA2DA3_HH-0.049-0.4113.1960.667-2.27336.295-0.3480.1693.213-3.644-1.06936.37
116GG_DT9DC10:DG1DA2_HH0.107-0.193.34-0.534-1.69539.134-0.076-0.2253.343-2.5290.79739.172

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.