A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 19-Sep-2018 number of released structures: 9779
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NDB ID: 6CVR  PDB ID: 6CVR 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13D_DA4:DT7_E-0.026-0.147-0.107-4.898-8.2815.608
16D_DA7:DT4_E0.207-0.1080.04-1.288-13.6942.556
19D_DC10:DG1_E0.186-0.209-0.174-2.69-13.1291.199
15D_DG6:DC5_E-0.201-0.1780.0719.48-10.5170.286
11D_DT2:DA9_E0.002-0.0760.215-14.829-9.412-0.002
12D_DT3:DA8_E-0.101-0.175-0.136-0.344-6.1850.012
14D_DT5:DA6_E0.021-0.188-0.0334.209-10.7621.636
17D_DT8:DA3_E-0.117-0.0610.2540.143-15.1032.137
18D_DT9:DA2_E-0.17-0.1380.046-1.03-15.8760.805
112G_DA4:DT7_H0.086-0.062-0.035-0.797-7.9664.96
115G_DA7:DT4_H0.143-0.124-0.006-1.01-13.5412.175
118G_DC10:DG1_H0.513-0.276-0.055-4.98-11.6023.106
114G_DG6:DC5_H-0.332-0.1640.1128.695-11.684-0.431
110G_DT2:DA9_H-0.084-0.1310.382-16.16-8.560.014
111G_DT3:DA8_H-0.035-0.182-0.1941.036-6.983-1.311
113G_DT5:DA6_H-0.139-0.1920.0657.288-10.4890.863
116G_DT8:DA3_H-0.112-0.1030.137-1.396-14.5362.524
117G_DT9:DA2_H-0.077-0.214-0.011-2.071-15.344-0.714

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.