A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Jul-2018 number of released structures: 9608
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NDB ID: 6CVT  PDB ID: 6CVT 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13D_DA4:DT7_E0.004-0.09-0.071-6.056-3.5753.696
16D_DA7:DT4_E0.089-0.1040.11-0.407-12.2562.187
19D_DC10:DG1_E0.228-0.144-0.389-1.672-5.3433.526
15D_DG6:DC5_E-0.135-0.1730.1974.846-6.812-0.024
11D_DT2:DA9_E-0.058-0.1620.324-10.818-14.4911.867
12D_DT3:DA8_E-0.075-0.1860.447-8.756-11.6941.489
14D_DT5:DA6_E-0.084-0.2070.2660.722-4.9180.416
17D_DT8:DA3_E-0.133-0.1320.078-5.019-14.6850.036
18D_DT9:DA2_E-0.048-0.131-0.165-3.773-13.4420.28
112G_DA4:DT7_H0.049-0.072-0.008-3.252-3.1660.945
115G_DA7:DT4_H0.0590.0050.0440.892-10.9774.245
118G_DC10:DG1_H0.233-0.104-0.144-4.841-8.4293.787
114G_DG6:DC5_H-0.159-0.1870.2744.539-5.1722.145
110G_DT2:DA9_H-0.097-0.180.188-14.138-8.1091.181
111G_DT3:DA8_H-0.249-0.211-0.191-3.444-10.023-1.47
113G_DT5:DA6_H0.005-0.0830.141.533-3.2063.821
116G_DT8:DA3_H-0.12-0.124-0.028-1.438-15.2661.27
117G_DT9:DA2_H-0.107-0.155-0.025-4.011-14.4231.063

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.