A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Jul-2018 number of released structures: 9608
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NDB ID: 6CVT  PDB ID: 6CVT 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13DD_DA4DT5:DA6DT7_EE-0.413-0.4853.126-3.223.2826.217-1.8740.0923.0717.1617.03126.61
16DD_DA7DT8:DA3DT4_EE-0.313-0.8793.3320.099-2.06733.505-1.1740.5593.377-3.581-0.17233.567
15DD_DG6DA7:DT4DC5_EE-0.164-0.5443.2430.1541.23237.916-0.9920.2713.2241.895-0.23737.935
11DD_DT2DT3:DA8DA9_EE-0.457-0.4033.231-0.863.50732.449-1.3150.6663.1826.2521.53332.644
12DD_DT3DA4:DT7DA8_EE-0.0670.3173.251-0.8894.03538.769-0.012-0.0063.2676.0581.33438.98
14DD_DT5DG6:DC5DA6_EE0.2260.1723.160.2524.34435.083-0.339-0.3353.167.173-0.41635.343
17DD_DT8DT9:DA2DA3_EE0.121-0.2263.2111.2780.7336.238-0.463-0.0193.2081.173-2.05336.266
18DD_DT9DC10:DG1DA2_EE0.326-0.2983.1990.47-0.18334.123-0.48-0.4823.204-0.311-0.80234.127
111GG_DA4DT5:DA6DT7_HH0.234-0.7963.194-0.9453.73326.761-2.612-0.733.0468.0132.02927.032
114GG_DA7DT8:DA3DT4_HH-0.306-0.8963.3490.175-2.77933.604-1.0780.5583.409-4.796-0.30333.716
113GG_DG6DA7:DT4DC5_HH-0.209-0.3463.262.0621.85237.604-0.7730.5883.2252.868-3.19437.702
19GG_DT2DT3:DA8DA9_HH-0.54-0.4683.012.240.84431.401-1.0061.3762.9521.556-4.13231.489
110GG_DT3DA4:DT7DA8_HH0.2460.0033.36-3.797.33636.823-0.968-0.8833.2611.4365.90937.706
112GG_DT5DG6:DC5DA6_HH0.0780.0013.173-0.6115.3435.237-0.751-0.2133.1388.7591.00235.631
115GG_DT8DT9:DA2DA3_HH0.017-0.3373.2511.209-0.36935.765-0.4950.1463.253-0.601-1.96735.787
116GG_DT9DC10:DG1DA2_HH0.39-0.0873.270.874-0.69736.335-0.042-0.5033.279-1.117-1.40136.352

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.